RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 POLR2HP52434 150 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 MBTPS1Q14703 1052 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 IQCJQ1A5X6 159 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 OPN5Q6U736 354 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF322Q6U7Q0 402 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 TAS1R3Q7RTX0 852 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CELF5Q8N6W0 485 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 OR5L1Q8NGL2 311 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SLC38A3Q99624 504 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SIGLEC1Q9BZZ2 1709 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 STBD1O95210 358 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SOX14O95416 240 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ARAFP10398 606 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 RPS19P39019 145 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF140P52738 457 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 BTN1A1Q13410 526 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CATSPEREQ5SY80 951 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SLC35D2Q76EJ3 337 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 HSD17B13Q7Z5P4 300 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF280BQ86YH2 543 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SLC35B4Q969S0 331 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 NAV2Q8IVL1 2488 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SNED1Q8TER0 1413 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 C17orf112F2Z3M2 114 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 KCNQ2O43526 872 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 FGF9P31371 208 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 PAN2Q504Q3 1202 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ELFN2Q5R3F8 820 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 B3GNTL1Q67FW5 361 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 FAM111BQ6SJ93 734 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 DPY19L4Q7Z388 723 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 WDR5BQ86VZ2 330 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CASTOR1Q8WTX7 329 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SMIM4Q8WVI0 70 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 HERVK_113Q902F9 699 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 NKD1Q969G9 470 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 FGGYQ96C11 551 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ACANP16112 2415 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 MYBPHLA2RUH7 354 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 KIR2DS3Q14952 304 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 YOD1Q5VVQ6 348 aaPredicted RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 OR13C3Q8NGS6 347 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF516Q92618 1163 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 MICU1Q9BPX6 476 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 PNO1Q9NRX1 252 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 NEDD8-MDP1E9PL57 170 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CLIC3O95833 236 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 DTYMKP23919 212 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 MAGEB1P43366 347 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 GPR68Q15743 365 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SIGIRRQ6IA17 410 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ASPGQ86U10 573 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 DCBLD1Q8N8Z6 715 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 HUS1BQ8NHY5 278 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ECHDC3Q96DC8 303 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CPEB1Q9BZB8 566 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 PRRG4Q9BZD6 226 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 PIRO00625 290 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SH3BGRLO75368 114 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 UBE2KP61086 200 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 GTDC1Q4AE62 458 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 TTLL10Q6ZVT0 673 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CDH26Q8IXH8 852 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF680Q8NEM1 530 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 YTHDF2Q9Y5A9 579 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 TPOP07202 933 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SMIM18P0DKX4 95 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ERVK-16P61578 105 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CAMKMTQ7Z624 323 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 KLHDC1Q8N7A1 406 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 OR51L1Q8NGJ5 315 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 ZBTB8AQ96BR9 441 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 GSTO2Q9H4Y5 243 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 MCCC2Q9HCC0 563 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 IL37Q9NZH6 218 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SERTAD3Q9UJW9 196 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 TCRBP04435 133 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 GABRR2P28476 465 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 WEE1P30291 646 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 PER3P56645 1201 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 RPS21P63220 83 aaKnown RBP6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SLC35A2P78381 396 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 TSPAN31Q12999 210 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 SPICQ8N5J4 248 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CLSTN3Q9BQT9 956 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 LMAN1LQ9HAT1 526 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 CRLF2Q9HC73 371 aa6.18□□□□□ -1.42
VPS13B-202ENST00000357162 HTR2CP28335 458 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SOX3P41225 446 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ADCYAP1R1P41586 468 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 GPLD1P80108 840 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MANEAQ5SRI9 462 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 MSI2Q96DH6 328 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 SERINC2Q96SA4 455 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 RAB22AQ9UL26 194 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 EXO1Q9UQ84 846 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 IGKV6-21A0A0C4DH24 114 aa6.17□□□□□ -1.42
VPS13B-202ENST00000357162 ARPC1BO15143 372 aaKnown RBP6.17□□□□□ -1.42
VPS13B-202ENST00000357162 FUCA1P04066 466 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms