RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 UNC119BA6NIH7 251 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 GTPBP1O00178 669 aaKnown RBP16.2■□□□□ 0.18
NPAS3-202ENST00000356141 GABARAPO95166 117 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 S100A1P23297 94 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 CDH11P55287 796 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 BCL2A1Q16548 175 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 C9orf40Q8IXQ3 194 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 TRMT61AQ96FX7 289 aaKnown RBP16.2■□□□□ 0.18
NPAS3-202ENST00000356141 ZNF559Q9BR84 538 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 DCSTAMPQ9H295 470 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 PCDHGB1Q9Y5G3 927 aa16.2■□□□□ 0.18
NPAS3-202ENST00000356141 EFCAB10A6NFE3 127 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 H0YIG0 161 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 SCRG1O75711 98 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 RGS6P49758 472 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 TOMM34Q15785 309 aaPredicted RBP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 TBCEQ15813 527 aaPredicted RBP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 SSX1Q16384 188 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 GARNL3Q5VVW2 1013 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 UBE2UQ5VVX9 321 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 Q6ZNX1 250 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 OAFQ86UD1 273 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 TMEM105Q8N8V8 129 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 STT3BQ8TCJ2 826 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 TMEM80Q96HE8 168 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 CD180Q99467 661 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 CCDC86Q9H6F5 360 aaKnown RBP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 PLCXD1Q9NUJ7 323 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 FKBP14Q9NWM8 211 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 ERGIC3Q9Y282 383 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 IGHV5-10-1A0A0J9YXX1 117 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 A0A1B0GTQ1 180 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 C2orf92A0A1B0GVN3 265 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 A0A1B0GX78 115 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 C19orf67A6NJJ6 358 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 MYL12BO14950 172 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 CDC40O60508 579 aaKnown RBP eCLIP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 SERPINB10P48595 397 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 EPHA4P54764 986 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 FUT7Q11130 342 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 COX10Q12887 443 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 ZSCAN1Q8NBB4 408 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 NLGN4YQ8NFZ3 816 aaPredicted RBP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 SLC38A2Q96QD8 506 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 LMF2Q9BU23 707 aaKnown RBP16.19■□□□□ 0.18
NPAS3-202ENST00000356141 PRDM9Q9NQV7 894 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 KLHL1Q9NR64 748 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 MED31Q9Y3C7 131 aa16.19■□□□□ 0.18
NPAS3-202ENST00000356141 CBFA2T3O75081 653 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ALOX12BO75342 701 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SLITRK5O94991 958 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 LYPD3O95274 346 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 NR0B2Q15466 257 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 PGGHGQ32M88 737 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 LYPD4Q6UWN0 246 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 RASSF6Q6ZTQ3 369 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 LILRB1Q8NHL6 650 aaPredicted RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 TMEM163Q8TC26 289 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 IFI44Q8TCB0 444 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SLC41A2Q96JW4 573 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 KCNS3Q9BQ31 491 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 GPN2Q9H9Y4 310 aaPredicted RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 FITM1A5D6W6 292 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SERINC4A6NH21 518 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 DDAH2O95865 285 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 GSTM3P21266 225 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 FPR3P25089 353 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ACVR2AP27037 513 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ATP12AP54707 1039 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 GPLD1P80108 840 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 FAM209AQ5JX71 171 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 OR2T33Q8NG76 320 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 POLDIP3Q9BY77 421 aaKnown RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 RACGAP1Q9H0H5 632 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 RPL36Q9Y3U8 105 aaKnown RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 BLOC1S5-TXNDC5H3BN57 136 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SURF4O15260 269 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 HCRTR2O43614 444 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 CLPXO76031 633 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 UTS2O95399 124 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 BMP7P18075 431 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 MTNR1AP48039 350 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SNRPGP62308 76 aaKnown RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ATP1A4Q13733 1029 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 EXOSC6Q5RKV6 272 aaKnown RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 HLA-DQA1Q5Y7H0 255 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 BICRALQ6AI39 1079 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 BMP8AQ7Z5Y6 402 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SDR9C7Q8NEX9 313 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 OR4K13Q8NH42 304 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ZNF721Q8TF20 911 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 OPALINQ96PE5 141 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 TM9SF2Q99805 663 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 TAPBPLQ9BX59 468 aa16.18■□□□□ 0.18
NPAS3-202ENST00000356141 SPIN1Q9Y657 262 aaPredicted RBP16.18■□□□□ 0.18
NPAS3-202ENST00000356141 ZNF354AO60765 605 aaPredicted RBP16.17■□□□□ 0.18
NPAS3-202ENST00000356141 CCL4P13236 92 aa16.17■□□□□ 0.18
NPAS3-202ENST00000356141 DRD5P21918 477 aa16.17■□□□□ 0.18
NPAS3-202ENST00000356141 RHAGQ02094 409 aa16.17■□□□□ 0.18
NPAS3-202ENST00000356141 DSG2Q14126 1118 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms