RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 TSFMP43897 325 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 GNG2P59768 71 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 HNRNPA0Q13151 305 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 LPAL2Q16609 132 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 C12orf73Q69YU5 71 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TUBA3EQ6PEY2 450 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 OAFQ86UD1 273 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 FAM98AQ8NCA5 519 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 OR2T33Q8NG76 320 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 CCDC86Q9H6F5 360 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 KLHL1Q9NR64 748 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 BLOC1S5-TXNDC5H3BN57 136 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 IMPA2O14732 288 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 FOXS1O43638 330 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 GSTM3P21266 225 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 PRKAR1BP31321 381 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ZNF136P52737 540 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 RAB38P57729 211 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 PRKCDQ05655 676 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 COX10Q12887 443 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 FAM69BQ5VUD6 431 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 CXXC5Q7LFL8 322 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 C16orf52Q8NHV5 167 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TMEM163Q8TC26 289 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ENKURQ8TC29 256 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ASB12Q8WXK4 309 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 CRELD1Q96HD1 420 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ARHGDIGQ99819 225 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SARGQ9BW04 601 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 UBQLN3Q9H347 655 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SIDT1Q9NXL6 827 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ACAD8Q9UKU7 415 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 DSPPQ9NZW4 1301 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1B0GWA3 101 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 UNC119BA6NIH7 251 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 CSTAP01040 98 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 DBIP07108 87 aaKnown RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 HOXC4P09017 264 aaPredicted RBP12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SDC2P34741 201 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 PSG6Q00889 435 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ZP2Q05996 745 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 DUSP8Q13202 625 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 LINC00299Q6ZSB3 139 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SDR9C7Q8NEX9 313 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TM9SF4Q92544 642 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ST6GAL2Q96JF0 529 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SIGLEC11Q96RL6 698 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 ADOQ96SZ5 270 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 NELL2Q99435 816 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 SMURF1Q9HCE7 757 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 TBC1D24Q9ULP9 559 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 MED31Q9Y3C7 131 aa12.84□□□□□ -0.35
TRIM4-201ENST00000349062 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 C12orf71A8MTZ7 269 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 GTPBP1O00178 669 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 LALBAP00709 142 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 NID1P14543 1247 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 SLC3A1Q07837 685 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 SNAPC3Q92966 411 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 FOXN4Q96NZ1 517 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ISG20L2Q9H9L3 353 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CRNNQ9UBG3 495 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF346Q9UL40 294 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CFL2Q9Y281 166 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ADAM18Q9Y3Q7 739 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CASKO14936 926 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CD27P26842 260 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 BMP8BP34820 402 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ACVR1BP36896 505 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 INPP1P49441 399 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 GPLD1P80108 840 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 NDUFA9Q16795 377 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ARL9Q6T311 187 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 RPTNQ6XPR3 784 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 BMP8AQ7Z5Y6 402 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ATP6V1C2Q8NEY4 427 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 OR6K6Q8NGW6 343 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 PCNPQ8WW12 178 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 TMCO6Q96DC7 493 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 POLDIP3Q9BY77 421 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 SLC25A19Q9HC21 320 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 FABP12A6NFH5 140 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 C4orf47A7E2U8 309 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CENPBD1B2RD01 187 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ICMTO60725 284 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 ZNF217O75362 1048 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 PSKH1P11801 424 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CD1CP29017 333 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CAPZBP47756 277 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 CCR5P51681 352 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 PGGHGQ32M88 737 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 EIPR1Q53HC9 387 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 Q5BKY6 102 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 RNASE12Q5GAN4 147 aaKnown RBP12.83□□□□□ -0.36
TRIM4-201ENST00000349062 MBOAT2Q6ZWT7 520 aa12.83□□□□□ -0.36
TRIM4-201ENST00000349062 GPR135Q8IZ08 494 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms