RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 FUT1P19526 365 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 HOXD11P31277 338 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 EXOSC2Q13868 293 aaKnown RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 SOWAHCQ53LP3 525 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 LY6G5CQ5SRR4 150 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 L3MBTL4Q8NA19 623 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 AVL9Q8NBF6 648 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 ST7LQ8TDW4 575 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 DDOQ99489 341 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 CSNK1G1Q9HCP0 422 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 SLC7A11Q9UPY5 501 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 NUDT19A8MXV4 375 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 SYT7O43581 403 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 CSF3P09919 207 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 PPT1P50897 306 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 ZNF322Q6U7Q0 402 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 OR4K17Q8NGC6 315 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 OR9A2Q8NGT5 310 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 TSPAN10Q9H1Z9 355 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 ACSS1Q9NUB1 689 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 NPFFR2Q9Y5X5 522 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 WNT6Q9Y6F9 365 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 FAM171A2A8MVW0 826 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 I6L893 689 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 AKR7A2O43488 359 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 INHAP05111 366 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 CPEP16870 476 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 MECP2P51608 486 aaKnown RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 PDX1P52945 283 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 OC90Q02509 493 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 PUS10Q3MIT2 529 aaKnown RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 RNF111Q6ZNA4 994 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 KHSRPQ92945 711 aaKnown RBP eCLIP16.93■□□□□ 0.34e-7■■■■■ 32.8
SMC4-201ENST00000344722 DZANK1Q9NVP4 752 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 PPP4R1LQ9P1A2 415 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 H0YIV9 168 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 FOXE1O00358 373 aaPredicted RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 TNFRSF10BO14763 440 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 SEC61A1P61619 476 aaKnown RBP16.93■□□□□ 0.3
SMC4-201ENST00000344722 CD163Q86VB7 1156 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 LRRTM3Q86VH5 581 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 OLIG1Q8TAK6 271 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 GHSRQ92847 366 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 OR8D2Q9GZM6 311 aa16.93■□□□□ 0.3
SMC4-201ENST00000344722 SLC19A1P41440 591 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 GPLD1P80108 840 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 TDGQ13569 410 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 SORBS1Q9BX66 1292 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 SLC25A32Q9H2D1 315 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 MYEF2Q9P2K5 600 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 ETV7Q9Y603 341 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 A0A0B4J2A0 478 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 STMND1H3BQB6 276 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 TPOP07202 933 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 PER3P56645 1201 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 ZBTB37Q5TC79 503 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 OR4N5Q8IXE1 308 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 RNF113BQ8IZP6 322 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 GLYATL2Q8WU03 294 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 SLC38A5Q8WUX1 472 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 SHPKQ9UHJ6 478 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 ZNF443Q9Y2A4 671 aaPredicted RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 ADAM10O14672 748 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 GYPBP06028 91 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 PRKAR1BP31321 381 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 ARRB2P32121 409 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 NLRC3Q7RTR2 1065 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 KANSL1Q7Z3B3 1105 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 PHYHIPQ92561 330 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 FAM212BQ9NTI7 297 aaPredicted RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 USP36Q9P275 1121 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 ZNF225Q9UK10 706 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 TRAPPC4Q9Y296 219 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 ADAM18Q9Y3Q7 739 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 A0A0U1RQS6 177 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 CDC123O75794 336 aaPredicted RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 PMS2P2O95744 297 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 PNMTP11086 282 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 RAB28P51157 221 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 EIF2B1Q14232 305 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 ZNF776Q68DI1 518 aaPredicted RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 FIP1L1Q6UN15 594 aaKnown RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 SEC22CQ9BRL7 303 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 TCEAL2Q9H3H9 227 aaPredicted RBP16.92■□□□□ 0.3
SMC4-201ENST00000344722 C2orf42Q9NWW7 574 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 PDE7AQ13946 482 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 SLC22A25Q6T423 547 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 RNF175Q8N4F7 328 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 DNAAF1Q8NEP3 725 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 ENY2Q9NPA8 101 aa16.92■□□□□ 0.3
SMC4-201ENST00000344722 SHOXO15266 292 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SCO1O75880 301 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 OPRD1P41143 372 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SRP9P49458 86 aaKnown RBP16.91■□□□□ 0.3
SMC4-201ENST00000344722 HCCSP53701 268 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SIRPAP78324 504 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 SIM1P81133 766 aaPredicted RBP16.91■□□□□ 0.3
SMC4-201ENST00000344722 GALK2Q01415 458 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 OR10K2Q6IF99 312 aa16.91■□□□□ 0.3
SMC4-201ENST00000344722 TMPRSS9Q7Z410 1059 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms