RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 CCDC28BQ9BUN5 200 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 FANCFQ9NPI8 374 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 P2RX2Q9UBL9 471 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 CLEC4AQ9UMR7 237 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 SPIN1Q9Y657 262 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 TMEM247A6NEH6 219 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 DNAJA2O60884 412 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 CGAP01215 116 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 SHC1P29353 583 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 CRATP43155 626 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 MRPL19P49406 292 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 IDH3AP50213 366 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 AQP5P55064 265 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 KCNJ10P78508 379 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 MERTKQ12866 999 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 RNPS1Q15287 305 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF239Q16600 458 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 COX20Q5RI15 118 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF474Q6S9Z5 364 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 ARFGAP2Q8N6H7 521 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 FAM71CQ8NEG0 241 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 VPS33AQ96AX1 596 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 SLC38A1Q9H2H9 487 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 MTHFD2LQ9H903 347 aaPredicted RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 TPT1P8Q9HAU6 139 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 CACYBPQ9HB71 228 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 EXOSC3Q9NQT5 275 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 ACER3Q9NUN7 267 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 THUMPD1Q9NXG2 353 aaKnown RBP14.39□□□□□ -0.11
ATG4B-201ENST00000344376 CALML5Q9NZT1 146 aa14.39□□□□□ -0.11
ATG4B-201ENST00000344376 PCNX3Q9H6A9 2034 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 POLQO75417 2590 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 PRAMEF27A3QJZ7 478 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 FAM221AA4D161 298 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 EFNA2O43921 213 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 C1QCP02747 245 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 CHRM4P08173 479 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 RYKP34925 604 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 SESN3P58005 492 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 IRX1P78414 480 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-201ENST00000344376 FAM27E3Q08E93 113 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 STK32CQ86UX6 486 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 MED12LQ86YW9 2145 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 PEX5LQ8IYB4 626 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF610Q8N9Z0 462 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 RNF128Q8TEB7 428 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 SLC25A43Q8WUT9 341 aaPredicted RBP14.38□□□□□ -0.11
ATG4B-201ENST00000344376 WDR60Q8WVS4 1066 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 MAGEB18Q96M61 343 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 QRSL1Q9H0R6 528 aaKnown RBP14.38□□□□□ -0.11
ATG4B-201ENST00000344376 RAD21L1Q9H4I0 556 aa14.38□□□□□ -0.11
ATG4B-201ENST00000344376 AGAP5A6NIR3 686 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 C16orf97H3BN30 126 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 DBIP07108 87 aaKnown RBP14.37□□□□□ -0.11
ATG4B-201ENST00000344376 UQCRBP14927 111 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 IL7RP16871 459 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 DSTNP60981 165 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 TMEM201Q5SNT2 666 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 PLEKHM3Q6ZWE6 761 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 FCRLAQ7L513 359 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 HMGN2P46Q86SG4 172 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 CDC20BQ86Y33 519 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 CKAP2Q8WWK9 683 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 ROBO4Q8WZ75 1007 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 ZG16BQ96DA0 208 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 EBF4Q9BQW3 602 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 MED18Q9BUE0 208 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 SRXN1Q9BYN0 137 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 COQ10BQ9H8M1 238 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 PLSCR4Q9NRQ2 329 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 SLC6A13Q9NSD5 602 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 ZNF226Q9NYT6 803 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 ADAM21Q9UKJ8 722 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 TESMINQ9Y4I5 508 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 OTOGQ6ZRI0 2925 aa14.37□□□□□ -0.11
ATG4B-201ENST00000344376 ETFAP13804 333 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 AGTR1P30556 359 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 DNAJA1P31689 397 aaKnown RBP14.36□□□□□ -0.11
ATG4B-201ENST00000344376 UGT2B10P36537 528 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 APOBEC1P41238 236 aaKnown RBP14.36□□□□□ -0.11
ATG4B-201ENST00000344376 CRISP3P54108 245 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 RAC3P60763 192 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 EXOC3L2Q2M3D2 409 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 GRINAQ7Z429 371 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 SLC43A2Q8N370 569 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 OR5B2Q96R09 309 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 TACO1Q9BSH4 297 aaKnown RBP14.36□□□□□ -0.11
ATG4B-201ENST00000344376 GP6Q9HCN6 339 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 TMEM45AQ9NWC5 275 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 CSMD2Q7Z408 3487 aa14.36□□□□□ -0.11
ATG4B-201ENST00000344376 ANKRD17O75179 2603 aaKnown RBP14.36□□□□□ -0.11
ATG4B-201ENST00000344376 A0A1W2PNR3 127 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 NR5A2O00482 541 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 PRKD3O94806 890 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 NID1P14543 1247 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 RPS4Y1P22090 263 aaKnown RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 FKBP2P26885 142 aaKnown RBP14.35□□□□□ -0.11
ATG4B-201ENST00000344376 HTR3AP46098 478 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 ATP4BP51164 291 aa14.35□□□□□ -0.11
ATG4B-201ENST00000344376 MVDP53602 400 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms