RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PLBD1Q6P4A8 553 aa11.51□□□□□ -0.57
FN1-202ENST00000336916 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
FN1-202ENST00000336916 CHDHQ8NE62 594 aaPredicted RBP11.51□□□□□ -0.57
FN1-202ENST00000336916 CNOT9Q92600 299 aaKnown RBP11.51□□□□□ -0.57
FN1-202ENST00000336916 FEVQ99581 238 aa11.51□□□□□ -0.57
FN1-202ENST00000336916 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
FN1-202ENST00000336916 FREM3P0C091 2139 aa11.51□□□□□ -0.57
FN1-202ENST00000336916 A8MVM7 634 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 F5H5K5 113 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 MOGSQ13724 837 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.5□□□□□ -0.572e-24■■■■□ 22.7
FN1-202ENST00000336916 GALNT10Q86SR1 603 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 OR4K5Q8NGD3 323 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ATP13A2Q9NQ11 1180 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 TIMP2P16035 220 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 TNFRSF17Q02223 184 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 EIF2B1Q14232 305 aaKnown RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 AGAP7PQ5VUJ5 663 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 AGAP6Q5VW22 663 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 PLCXD3Q63HM9 321 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 GPR149Q86SP6 731 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 LRRC56Q8IYG6 542 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 OR4N2Q8NGD1 307 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HYLS1Q96M11 299 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 AGAP4Q96P64 663 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 DPH2Q9BQC3 489 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 ERVPABLB-1P60509 514 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 RUNX2Q13950 521 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 PIAS4Q8N2W9 510 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 WDTC1Q8N5D0 677 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 OR5AR1Q8NGP9 310 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 OR8K3Q8NH51 312 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 TSSK2Q96PF2 358 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ZNF443Q9Y2A4 671 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 ZNF407Q9C0G0 2248 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 MDFIC2A0A1B0GVS7 189 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 TNFRSF10CO14798 259 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ADAM23O75077 832 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 AKAIN1P0CW23 69 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ITGAMP11215 1152 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 IL7P13232 177 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 DCTP40126 519 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HLCSP50747 726 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 SMAD4Q13485 552 aaKnown RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 GPRIN1Q7Z2K8 1008 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 SULF2Q8IWU5 870 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HSPB11Q9Y547 144 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NME7Q9Y5B8 376 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 SHOXO15266 292 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NOVP48745 357 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ZFAND2BQ8WV99 257 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 C19orf43Q9BQ61 176 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 TPSD1Q9BZJ3 242 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NPIPA7E9PJI5 369 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 H3BML4 177 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NPIPA8P0DM63 369 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 UQCRC1P31930 480 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 SOX4Q06945 474 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 OR7A5Q15622 319 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NRMQ8IXM6 262 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 OR6F1Q8NGZ6 308 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 OR51Q1Q8NH59 317 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 NDNFQ8TB73 568 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 WDR20Q8TBZ3 569 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 REV1Q9UBZ9 1251 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 FBXL3Q9UKT7 428 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 ZNF780AO75290 641 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 GMPRP36959 345 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HBG1P69891 147 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HBG2P69892 147 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 CHST14Q8NCH0 376 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 CIDECQ96AQ7 238 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 SENP5Q96HI0 755 aaPredicted RBP11.5□□□□□ -0.57
FN1-202ENST00000336916 NICN1Q9BSH3 213 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 HCFC2Q9Y5Z7 792 aa11.5□□□□□ -0.57
FN1-202ENST00000336916 MGAMO43451 1857 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 OR6C76A6NM76 312 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 KIAA0513O60268 411 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 LRRC28Q86X40 367 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ATOH1Q92858 354 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 WDR83Q9BRX9 315 aaKnown RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 ABCG5Q9H222 651 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 TMEM185BQ9H7F4 350 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ZNF696Q9H7X3 374 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SGK494L7N484 410 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 FANCGO15287 622 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 GPR39O43194 453 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 GABBR2O75899 941 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ZNF133P52736 654 aaPredicted RBP11.49□□□□□ -0.57
FN1-202ENST00000336916 AADACL4Q5VUY2 407 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 PLAG1Q6DJT9 500 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 IGDCC3Q8IVU1 814 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 PHYHIPQ92561 330 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 NEIL2Q969S2 332 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 SLCO5A1Q9H2Y9 848 aa11.49□□□□□ -0.57
FN1-202ENST00000336916 ZNF576Q9H609 170 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms