RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 GALP22466 123 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 KIR2DL3P43628 341 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 INPP1P49441 399 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 MRPS15P82914 257 aaKnown RBP16.35■□□□□ 0.21
LRCH3-201ENST00000334859 PSG6Q00889 435 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 CSTF1Q05048 431 aaKnown RBP16.35■□□□□ 0.21
LRCH3-201ENST00000334859 SLC3A1Q07837 685 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 NNATQ16517 81 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 PMM1Q92871 262 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 FRMD6Q96NE9 622 aa16.35■□□□□ 0.21
LRCH3-201ENST00000334859 DNAJB12Q9NXW2 375 aaKnown RBP16.35■□□□□ 0.21
LRCH3-201ENST00000334859 TDRD6O60522 2096 aaKnown RBP16.35■□□□□ 0.21
LRCH3-201ENST00000334859 GON4LQ3T8J9 2241 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 A0A0A6YYC8 382 aaPredicted RBP16.34■□□□□ 0.21
LRCH3-201ENST00000334859 E9PI62 339 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 I3L1I5 382 aaPredicted RBP16.34■□□□□ 0.21
LRCH3-201ENST00000334859 PSKH1P11801 424 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 DDOSTP39656 456 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 MTNR1BP49286 362 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 STX4Q12846 297 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 EIF2B5Q13144 721 aaKnown RBP16.34■□□□□ 0.21
LRCH3-201ENST00000334859 METAP1DQ6UB28 335 aaPredicted RBP16.34■□□□□ 0.21
LRCH3-201ENST00000334859 NR2C2APQ86WQ0 139 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 AVL9Q8NBF6 648 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 C4orf36Q96KX1 117 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 TNFRSF13CQ96RJ3 184 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 INPP5EQ9NRR6 644 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 TRIOO75962 3097 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 HMX3A6NHT5 357 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 J3QLW9 94 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 HRKO00198 91 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 IGKV1D-16P01601 117 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 NGFRP08138 427 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 SBK2P0C263 348 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 ZNF19P17023 458 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 F8A1P23610 371 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 E2F1Q01094 437 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 IFITM2Q01629 132 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 CRYZQ08257 329 aaKnown RBP16.34■□□□□ 0.21
LRCH3-201ENST00000334859 BCL2A1Q16548 175 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 FAM27D1Q5T7N8 215 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 PLET1Q6UQ28 207 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 RIT1Q92963 219 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 SOSTQ9BQB4 213 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 TTTY10Q9BZA0 68 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 TRIM2Q9C040 744 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 OR2B2Q9GZK3 357 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 SEMA6CQ9H3T2 930 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 ADGRL4Q9HBW9 690 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 POMT2Q9UKY4 750 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 CYP8B1Q9UNU6 501 aa16.34■□□□□ 0.21
LRCH3-201ENST00000334859 A0A0B4J293 547 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SLC19A2O60779 497 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 HLA-DQB1P01920 261 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 THEGLP0DJG4 465 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 PRKAR1AP10644 381 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 HK1P19367 917 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SLC6A6P31641 620 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 FAM53BQ14153 422 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RAB30Q15771 203 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 MZT2BQ6NZ67 158 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 IL20RBQ6UXL0 311 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RPTNQ6XPR3 784 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 GLCCI1Q86VQ1 547 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 GPALPP1Q8IXQ4 340 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SLC7A5P1Q8MH63 180 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 C19orf47Q8N9M1 422 aaKnown RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SMPDL3BQ92485 455 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RNF31Q96EP0 1072 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RBM18Q96H35 190 aaKnown RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 PEX11GQ96HA9 241 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 GAS2L1Q99501 681 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 PPIL3Q9H2H8 161 aaKnown RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 EXTL2Q9UBQ6 330 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 NUFIP1Q9UHK0 495 aaKnown RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 MMP17Q9ULZ9 603 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 DTX4Q9Y2E6 619 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SPTBP11277 2137 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 HYAL3O43820 417 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 PTP4A3O75365 173 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 IFNGP01579 166 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 IFI6P09912 130 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ELK1P19419 428 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SHC1P29353 583 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ZNF362Q5T0B9 420 aaPredicted RBP16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ARHGAP11AQ6P4F7 1023 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RTL4Q6ZR62 310 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ACOT12Q8WYK0 555 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 BEX2Q9BXY8 128 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 MCCC2Q9HCC0 563 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 KLHL1Q9NR64 748 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 RPS6KB2Q9UBS0 482 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 ZMIZ1Q9ULJ6 1067 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 BAIAP2Q9UQB8 552 aa16.33■□□□□ 0.2
LRCH3-201ENST00000334859 SPTY2D1-AS1A0A0U1RR47 76 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 CENPXA8MT69 81 aa16.32■□□□□ 0.2
LRCH3-201ENST00000334859 PEPDP12955 493 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms