RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 A0A1B0GTW7 788 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SYT7O43581 403 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SLC16A7O60669 478 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SCRG1O75711 98 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 IFNA7P01567 189 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 IFNA21P01568 189 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 CHRFAM7AQ494W8 412 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF582Q96NG8 517 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 OR5M11Q96RB7 305 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 OR52A5Q9H2C5 316 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 TESQ9UGI8 421 aaKnown RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PSORS1C1Q9UIG5 152 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF831Q5JPB2 1677 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 DCNP07585 359 aaKnown RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 IGFBP1P08833 259 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 GDF7Q7Z4P5 450 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 INIPQ9NRY2 104 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 MGAT4CQ9UBM8 478 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 FBXO9Q9UK97 447 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 TRAV18A0A075B6X5 111 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 FUOMA2VDF0 154 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 F5H5K5 113 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SOCS6O14544 535 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 CTDSP2O14595 271 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 RBM34P42696 430 aaKnown RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 RIN1Q13671 783 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PAQR5Q9NXK6 330 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SNX11Q9Y5W9 270 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 KDM4EB2RXH2 506 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 RPS25P62851 125 aaKnown RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 VAMP2P63027 116 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PPP1R3BQ86XI6 285 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 CCDC54Q8NEL0 328 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 HRASLS5Q96KN8 279 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 MBOAT4Q96T53 435 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 DUSP23Q9BVJ7 150 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SLC6A15Q9H2J7 730 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SEMA4GQ9NTN9 838 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 DOK2O60496 412 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
VSTM4-202ENST00000332853 P2RY14Q15391 338 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 VASNQ6EMK4 673 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 MBOAT2Q6ZWT7 520 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 MED25Q71SY5 747 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PLCZ1Q86YW0 608 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PARP16Q8N5Y8 322 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF611Q8N823 705 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 PFN4Q8NHR9 129 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 INTS14Q96SY0 518 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 CENPOQ9BU64 300 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SPNS1Q9H2V7 528 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
VSTM4-202ENST00000332853 LOC105369274A0A096LPK9 316 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 LOC102723532A0A0G2JNH3 316 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 TEX13CA0A0J9YWL9 993 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 A6NCN8 305 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 MEN1O00255 615 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 HMGN4O00479 90 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 HSPA12AO43301 675 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 GSTT2P0CG29 244 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 SMIM18P0DKX4 95 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 EIF2DP41214 584 aaKnown RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 PITPNBP48739 271 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 KDM4DQ6B0I6 523 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 OR4N4Q8N0Y3 316 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 LRRC20Q8TCA0 184 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CPNE2Q96FN4 548 aaPredicted RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 ELF4Q99607 663 aaPredicted RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 THOC7Q6I9Y2 204 aaKnown RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 KIAA1211LQ6NV74 962 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 DUSP19Q8WTR2 217 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 SULT2B1O00204 365 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 ZNF264O43296 627 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 SNRPD2P62316 118 aaKnown RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 AGBL4Q5VU57 503 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 MFSD12Q6NUT3 480 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CREB3L1Q96BA8 519 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 MRGPRX1Q96LB2 322 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 LMF2Q9BU23 707 aaKnown RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 NRSN2Q9GZP1 204 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 SLC7A11Q9UPY5 501 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 PCDHGA6Q9Y5G7 932 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 TCRBV5S2A0A599 114 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CIB4A0PJX0 185 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CAPZA1P52907 286 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 HERV-K104P61576 105 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 ADARB1P78563 741 aaKnown RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 MLLT11Q13015 90 aaPredicted RBP12.1□□□□□ -0.47
VSTM4-202ENST00000332853 EFR3AQ14156 821 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 TCTN1Q2MV58 587 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 TMEM215Q68D42 235 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 BORAQ6PGQ7 559 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 KATNB1Q9BVA0 655 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 CLEC2DQ9UHP7 191 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 RASD1Q9Y272 281 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 GABRPO00591 440 aa12.1□□□□□ -0.47
VSTM4-202ENST00000332853 LYRM1O43325 122 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms