RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ACOT11Q8WXI4 607 aaPredicted RBP9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 MPP4Q96JB8 637 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 SIGLEC12Q96PQ1 595 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 C12orf10Q9HB07 376 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 TAS2R10Q9NYW0 307 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 PLA2G3Q9NZ20 509 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 MED11Q9P086 117 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A1W2PRS3 328 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 H0YJX3 145 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 K7ENP7 123 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 CDC40O60508 579 aaKnown RBP eCLIP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC25A12O75746 678 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 F10P00742 488 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ALPLP05186 524 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 GP1BBP13224 206 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 RBM34P42696 430 aaKnown RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 DLX5P56178 289 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF770Q6IQ21 691 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 INO80CQ6PI98 192 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 IZUMO2Q6UXV1 221 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ST8SIA1Q92185 356 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF597Q96LX8 424 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 DSN1Q9H410 356 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 KIF17Q9P2E2 1029 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A087WUU8 490 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 G3V3Y1 287 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ETV2O00321 342 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 GNB5O14775 395 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 PNMTP11086 282 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 CNR1P21554 472 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 PRKACGP22612 351 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 MASP1P48740 699 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 TMPRSS3P57727 454 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 FOXD4Q12950 439 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 TOMM34Q15785 309 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 SPINK14Q6IE38 97 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF730Q6ZMV8 503 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 WDR88Q6ZMY6 472 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ATG4DQ86TL0 474 aaPredicted RBP9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 GALNT4Q8N4A0 578 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 OR4K5Q8NGD3 323 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 OR9Q2Q8NGE9 314 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM255BQ8WV15 326 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 TMEM234Q8WY98 164 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 HAS2Q92819 552 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF524Q96C55 264 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 HS6ST2Q96MM7 605 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF426Q9BUY5 554 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 ADAM19Q9H013 955 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 SMURF2Q9HAU4 748 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 FBXL2Q9UKC9 423 aa9.32□□□□□ -0.92
VIPAS39-201ENST00000327028 NME2P1O60361 137 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 OR10H3O60404 316 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ANXA8P13928 327 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 NME2P22392 152 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 CBLP22681 906 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 DNASE1L1P49184 302 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ZNF41P51814 821 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 AQP4P55087 323 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ARG2P78540 354 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 INPP5JQ15735 1006 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TIGD3Q6B0B8 471 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 LINC00114Q6XXX2 140 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 MBOAT2Q6ZWT7 520 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 GRINAQ7Z429 371 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 RNF217Q8TC41 542 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 DNAJC9Q8WXX5 260 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 C1GALT1C1Q96EU7 318 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 SMAD5Q99717 465 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 FAM173AQ9BQD7 235 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TACO1Q9BSH4 297 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PTGES2Q9H7Z7 377 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 MED17Q9NVC6 651 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 MGAT4BQ9UQ53 548 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PCDHGB6Q9Y5F9 930 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PCNX3Q9H6A9 2034 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ANKRD11Q6UB99 2663 aaPredicted RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A087WUJ7 227 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 A0A087WZY1 265 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 LRRC3CA6NJW4 275 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 C1QTNF9BB2RNN3 333 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 FAM47E-STBD1D6RA91 191 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 NTN1O95631 604 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 ADAP00813 363 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 C1QTNF9P0C862 333 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PRKCAP17252 672 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 IGFBP5P24593 272 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 TACR3P29371 465 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 IFNGR2P38484 337 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 HTR3AP46098 478 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 DAPP51397 102 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 POLR2HP52434 150 aaKnown RBP9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 UGT2B15P54855 530 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 PLPPR5Q32ZL2 321 aa9.31□□□□□ -0.92
VIPAS39-201ENST00000327028 SLC25A53Q5H9E4 307 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms