RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 GIFP27352 417 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 GGHQ92820 318 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 MUL1Q969V5 352 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 SSTP61278 116 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 CXADRP78310 365 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 GLB1L2Q8IW92 636 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 FAM3CQ92520 227 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 DTD2Q96FN9 168 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 NMNAT2Q9BZQ4 307 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.72■□□□□ 0.75
RNF40-201ENST00000324685 A0A0A6YYC8 382 aaPredicted RBP19.72■□□□□ 0.75
RNF40-201ENST00000324685 I3L1I5 382 aaPredicted RBP19.72■□□□□ 0.75
RNF40-201ENST00000324685 PCBD1P61457 104 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 LTBQ06643 244 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 ACTBL2Q562R1 376 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 TAAR8Q969N4 342 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 PLCXD1Q9NUJ7 323 aa19.72■□□□□ 0.75
RNF40-201ENST00000324685 CD63P08962 238 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 TAS2R46P59540 309 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 TPSD1Q9BZJ3 242 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 CCDC163A0A0D9SF12 145 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 CRHBPP24387 322 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 ETV5P41161 510 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 OR1Q1Q15612 314 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 RPL22L1Q6P5R6 122 aaKnown RBP19.71■□□□□ 0.75
RNF40-201ENST00000324685 SLC39A5Q6ZMH5 540 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 SIMC1Q8NDZ2 872 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 OR4M1Q8NGD0 313 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 RAB39BQ96DA2 213 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 CICQ96RK0 1608 aaPredicted RBP19.71■□□□□ 0.75
RNF40-201ENST00000324685 MSR1P21757 451 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 NFYAP23511 347 aaPredicted RBP19.71■□□□□ 0.75
RNF40-201ENST00000324685 GMLQ99445 158 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 CDCA3Q99618 268 aaPredicted RBP19.71■□□□□ 0.75
RNF40-201ENST00000324685 RTP3Q9BQQ7 232 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 TRAV27A0A087WT01 109 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 TSPAN11A1L157 253 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 CYB5BO43169 146 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 MPEG1Q2M385 716 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 LRRTM3Q86VH5 581 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 SDSLQ96GA7 329 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 KLF16Q9BXK1 252 aaPredicted RBP19.71■□□□□ 0.75
RNF40-201ENST00000324685 GON7Q9BXV9 100 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 LUZP4Q9P127 313 aa19.71■□□□□ 0.75
RNF40-201ENST00000324685 A0A1W2PPV4 95 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 A0A1W2PQ09 198 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 POU3F2P20265 443 aaPredicted RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 IL4RP24394 825 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 GPR18Q14330 331 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 NR0B2Q15466 257 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 RABEPKQ7Z6M1 372 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 NXF5Q9H1B4 397 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 PDLIM7Q9NR12 457 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 PRMT8Q9NR22 394 aaPredicted RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 PTTG3PQ9NZH4 202 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 OR6T1Q8NGN1 323 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 OR6F1Q8NGZ6 308 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 TERB2Q8NHR7 220 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 CASD1Q96PB1 797 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 METTL15A6NJ78 407 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 DPM1O60762 260 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 PRDX3P30048 256 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 AFF3P51826 1226 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 LCN10Q6JVE6 187 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 Q6ZSR6 202 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 GPR155Q7Z3F1 870 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 S100A7AQ86SG5 101 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 FAM160A2Q8N612 972 aaPredicted RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 CPNE7Q9UBL6 633 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 IGHG1P01857 330 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 EXOSC6Q5RKV6 272 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 KCNIP4Q6PIL6 250 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 MCATQ8IVS2 390 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 RSPRY1Q96DX4 576 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 VSX1Q9NZR4 365 aaPredicted RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 SLC16A7O60669 478 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 TNFSF8P32971 234 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 EIF2DP41214 584 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 RAB5CP51148 216 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 SEC61A1P61619 476 aaKnown RBP19.7■□□□□ 0.74
RNF40-201ENST00000324685 BATFQ16520 125 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 MKXQ8IYA7 352 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 MIB2Q96AX9 1013 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 UPRTQ96BW1 309 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 PRDM9Q9NQV7 894 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 ZNF281Q9Y2X9 895 aa19.7■□□□□ 0.74
RNF40-201ENST00000324685 LCMT2O60294 686 aaKnown RBP19.69■□□□□ 0.74
RNF40-201ENST00000324685 DCAF7P61962 342 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 MSMO1Q15800 293 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 ENKD1Q9H0I2 346 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 EMCNQ9ULC0 261 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 OR52A4PA6NMU1 304 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 GABRPO00591 440 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 LDB3O75112 727 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 XCR1P46094 333 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 RAP2BP61225 183 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 SLC14A1Q13336 389 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 RDH10Q8IZV5 341 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 TIMM29Q9BSF4 260 aa19.69■□□□□ 0.74
RNF40-201ENST00000324685 SLC6A20Q9NP91 592 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms