RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 OR2M2Q96R28 347 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 MRI1Q9BV20 369 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 ZNF160Q9HCG1 818 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 VDAC3Q9Y277 283 aa7.44□□□□□ -1.22
CIITA-201ENST00000324288 NAP1L6A6NFF2 107 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 M0QYG6 137 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 LRRTM2O43300 516 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ZDHHC11BP0C7U3 371 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 VIPR2P41587 438 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ARSDP51689 593 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ARG2P78540 354 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 LGALS14Q8TCE9 139 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR5P2Q8WZ92 322 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 IRF7Q92985 503 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CHFRQ96EP1 664 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 BOCQ9BWV1 1114 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ADAM19Q9H013 955 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SIDT1Q9NXL6 827 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 USP22Q9UPT9 525 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ACTL7AQ9Y615 435 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 MST1RQ04912 1400 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 AGAP14A8MT82 685 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 HIDE1A8MVS5 230 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 FCN2Q15485 313 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SGPP2Q8IWX5 399 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SMAP2Q8WU79 429 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC2A13Q96QE2 648 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 INTS6Q9UL03 887 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC7A7Q9UM01 511 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PCDHGA5Q9Y5G8 931 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 C1GALT1C1LP0DN25 315 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TAS2R20P59543 309 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ERVPABLB-1P60509 514 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PRAMEF8Q5VWM4 474 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PRAMEF7Q5VXH5 474 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PGM2L1Q6PCE3 622 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 AVL9Q8NBF6 648 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TAAR8Q969N4 342 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 EHFQ9NZC4 300 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CLDN12P56749 244 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 AAK1Q2M2I8 961 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR4K5Q8NGD3 323 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR9A2Q8NGT5 310 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 RBMXL1Q96E39 390 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 ST6GALNAC4Q9H4F1 302 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TAS2R8Q9NYW2 309 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OSGIN1Q9UJX0 560 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 GLTPD2A6NH11 291 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 KRBOX1C9JBD0 128 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ADAM10O14672 748 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 KIAA1024LP59773 190 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CXADRP78310 365 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 VAMP3Q15836 100 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 FBXW12Q6X9E4 464 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 NRARPQ7Z6K4 114 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 RSPRY1Q96DX4 576 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC30A3Q99726 388 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ZNF559Q9BR84 538 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TINAGL1Q9GZM7 467 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 V9GYS6 101 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ARFGEF2Q9Y6D5 1785 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 RFXAPO00287 272 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 MSTNO14793 375 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 FZD7O75084 574 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC5A2P31639 672 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TP53INP2Q8IXH6 220 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 FAM185AQ8N0U4 392 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 CPXM2Q8N436 756 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR52B6Q8NGF0 335 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 C22orf15Q8WYQ4 148 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SGK3Q96BR1 496 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 WDR92Q96MX6 357 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SNX18Q96RF0 628 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SMCO4Q9NRQ5 59 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 LMO7Q8WWI1 1683 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 MT-CO2P00403 227 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PMP2P02689 132 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 BMP2P12643 396 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 OR4C11Q6IEV9 310 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 BRICD5Q6PL45 260 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TPSD1Q9BZJ3 242 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 APOBEC3BQ9UH17 382 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 C20orf202A1L168 122 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SNRPBP14678 240 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 EEF1A2Q05639 463 aaKnown RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 KIAA0141Q14154 515 aaPredicted RBP7.43□□□□□ -1.22
CIITA-201ENST00000324288 UBE2NLQ5JXB2 153 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 MOAP1Q96BY2 351 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 TMEM19Q96HH6 336 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 INTS14Q96SY0 518 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC2A4RGQ9NR83 387 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 IGSF5Q9NSI5 407 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 ARL2-SNX15V9GYD0 113 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 A0A1W2PPV4 95 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SLC22A31A6NKX4 558 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 PFKMP08237 780 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 FAM163BP0C2L3 166 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 GABRB3P28472 473 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 SOHLH1Q5JUK2 328 aa7.43□□□□□ -1.22
CIITA-201ENST00000324288 C6orf132Q5T0Z8 1188 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms