RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SZRD1Q7Z422 152 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 SLC43A2Q8N370 569 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 FBXO27Q8NI29 283 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 PSMA8Q8TAA3 256 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 MGARPQ8TDB4 240 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 NEUROG1Q92886 237 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 KISS1RQ969F8 398 aaPredicted RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 PRPF18Q99633 342 aaKnown RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 POTEKPQ9BYX7 375 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 TRIM2Q9C040 744 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 SLCO5A1Q9H2Y9 848 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 BCO1Q9HAY6 547 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 ATAD3AQ9NVI7 634 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 NOP53Q9NZM5 478 aaKnown RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 ATP6V1HQ9UI12 483 aa12.62□□□□□ -0.39
RPP40-201ENST00000319533 ING1Q9UK53 422 aaPredicted RBP12.62□□□□□ -0.39
RPP40-201ENST00000319533 DPRXA6NFQ7 191 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 NPIPB9F8W1W9 429 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 CLOCKO15516 846 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 ADAP00813 363 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 CD8AP01732 235 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
RPP40-201ENST00000319533 PRKCAP17252 672 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 PRPS1L1P21108 318 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 RAC3P60763 192 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 EMX2Q04743 252 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 BST1Q10588 318 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 PTGR1Q14914 329 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 SMU1Q2TAY7 513 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.61□□□□□ -0.39
RPP40-201ENST00000319533 CDC73Q6P1J9 531 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 Q6ZT83 130 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 ATG4DQ86TL0 474 aaPredicted RBP12.61□□□□□ -0.39
RPP40-201ENST00000319533 DTX2Q86UW9 622 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 HIPK1Q86Z02 1210 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 NATD1Q8N6N6 113 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 ZNF527Q8NB42 609 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 MAPK1IP1LQ8NDC0 245 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 PHOSPHO1Q8TCT1 267 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 GPR119Q8TDV5 335 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 ZFP90Q8TF47 636 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 CDS1Q92903 461 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 ZNF524Q96C55 264 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 OTUB1Q96FW1 271 aaPredicted RBP12.61□□□□□ -0.39
RPP40-201ENST00000319533 MRGPRX4Q96LA9 322 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 PPP1R36Q96LQ0 422 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 TRAF4Q9BUZ4 470 aaPredicted RBP12.61□□□□□ -0.39
RPP40-201ENST00000319533 ZCCHC3Q9NUD5 404 aaKnown RBP12.61□□□□□ -0.39
RPP40-201ENST00000319533 LIPT1Q9Y234 373 aa12.61□□□□□ -0.39
RPP40-201ENST00000319533 GOLGA8QA0A0J9YX86 632 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 A0A1W2PP18 115 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 GOLGA8OA6NCC3 632 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 GOLGA8NF8WBI6 632 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 POLR3GO15318 223 aaPredicted RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 CD5LO43866 347 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 IGHV4-39P01824 125 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 FESP07332 822 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 ENPP1P22413 925 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 ACVR1BP36896 505 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 CDKN1AP38936 164 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 OR3A2P47893 321 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 ATP12AP54707 1039 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 BSPH1Q075Z2 132 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 LASP1Q14847 261 aaKnown RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 TOMM34Q15785 309 aaPredicted RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 TMEM176BQ3YBM2 270 aaPredicted RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 ATG16L1Q676U5 607 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 ALKBH2Q6NS38 261 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 BHLHA15Q7RTS1 189 aaPredicted RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 SSX8Q7RTT4 187 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 KBTBD8Q8NFY9 601 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 OR7A2PQ8NGA2 310 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 GTPBP3Q969Y2 492 aaKnown RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 SORT1Q99523 831 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 PSD2Q9BQI7 771 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 REPIN1Q9BWE0 567 aaKnown RBP12.6□□□□□ -0.39
RPP40-201ENST00000319533 ACTRT3Q9BYD9 372 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 C20orf27Q9GZN8 174 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 CXorf36Q9H7Y0 433 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 GPATCH2Q9NW75 528 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 ASIC5Q9NY37 505 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 HAO1Q9UJM8 370 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 CARD8Q9Y2G2 431 aa12.6□□□□□ -0.39
RPP40-201ENST00000319533 SHISA9B4DS77 424 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 H3BNH8 94 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 DNAJA2O60884 412 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 PGM3O95394 542 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 G6PDP11413 515 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 COX5AP20674 150 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 EFNA1P20827 205 aaPredicted RBP12.59□□□□□ -0.39
RPP40-201ENST00000319533 ATP6V1C1P21283 382 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 WDR4P57081 412 aaKnown RBP12.59□□□□□ -0.39
RPP40-201ENST00000319533 SELENBP1Q13228 472 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 DCST2Q5T1A1 773 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 PODNL1Q6PEZ8 512 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 ZNF619Q8N2I2 560 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 OR5P2Q8WZ92 322 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 JADE3Q92613 823 aa12.59□□□□□ -0.39
RPP40-201ENST00000319533 ZNF75CPQ92670 426 aaPredicted RBP12.59□□□□□ -0.39
RPP40-201ENST00000319533 NUF2Q9BZD4 464 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms