RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 TBPL2Q6SJ96 375 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 CBLN3Q6UW01 205 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 HS3ST5Q8IZT8 346 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 CYP4Z2PQ8N1L4 340 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 BEST3Q8N1M1 668 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 GALNT4Q8N4A0 578 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 MAGEE2Q8TD90 523 aaPredicted RBP12.84□□□□□ -0.35
MSRA-201ENST00000317173 NTNG2Q96CW9 530 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 HS6ST2Q96MM7 605 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 ANGPTL4Q9BY76 406 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 SLC25A18Q9H1K4 315 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 CTPS2Q9NRF8 586 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 STMN3Q9NZ72 180 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 SELENONQ9NZV5 590 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 KIF17Q9P2E2 1029 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 KCNMB2Q9Y691 235 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 MED13Q9UHV7 2174 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 EML6Q6ZMW3 1958 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 CFAP46Q8IYW2 2715 aa12.84□□□□□ -0.35
MSRA-201ENST00000317173 TRBV4-1A0A0J9YWV2 114 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 A0A1B0GWA3 101 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 B8ZZF3 427 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 SNX4O95219 450 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 CDH2P19022 906 aaPredicted RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 CCR4P51679 360 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 RAD23AP54725 363 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 AQP4P55087 323 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 ALG10BQ5I7T1 473 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 KDM4DQ6B0I6 523 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 PODNL1Q6PEZ8 512 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 RRM2BQ7LG56 351 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 RNF113BQ8IZP6 322 aaKnown RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 ATG16L2Q8NAA4 619 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 DUSP19Q8WTR2 217 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 PRR14Q9BWN1 585 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 RNF32Q9H0A6 362 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 ING2Q9H160 280 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 KRCC1Q9NPI7 259 aaPredicted RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 SMPD3Q9NY59 655 aaPredicted RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 PPP4R1LQ9P1A2 415 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 ENOPH1Q9UHY7 261 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 MGAT4BQ9UQ53 548 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 LRRC42Q9Y546 428 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 PCDHGB6Q9Y5F9 930 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 ORC6Q9Y5N6 252 aa12.83□□□□□ -0.35
MSRA-201ENST00000317173 MAGED1Q9Y5V3 778 aaPredicted RBP12.83□□□□□ -0.35
MSRA-201ENST00000317173 SPTA1P02549 2419 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 HTR3EA5X5Y0 456 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 ANKUB1A6NFN9 424 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 OIP5O43482 229 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 LYPD3O95274 346 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 ADAP00813 363 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 THY1P04216 161 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 PNMTP11086 282 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 IGFBP5P24593 272 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 RYKP34925 604 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 IDH2P48735 452 aaKnown RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 NFATC3Q12968 1075 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 AGAP7PQ5VUJ5 663 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 ZNF770Q6IQ21 691 aaPredicted RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 ISLR2Q6UXK2 745 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 APLFQ8IW19 511 aaPredicted RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 CADM2Q8N3J6 435 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 ZNF563Q8TA94 476 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 C9orf43Q8TAL5 461 aaPredicted RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 TMEM234Q8WY98 164 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 SH3YL1Q96HL8 342 aaPredicted RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 AGAP4Q96P64 663 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 FEVQ99581 238 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 BARD1Q99728 777 aaKnown RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 PRSS27Q9BQR3 290 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 UTP23Q9BRU9 249 aaKnown RBP12.83□□□□□ -0.36
MSRA-201ENST00000317173 ZNF426Q9BUY5 554 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 ZNF556Q9HAH1 456 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 SMURF2Q9HAU4 748 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 NTNG1Q9Y2I2 539 aa12.83□□□□□ -0.36
MSRA-201ENST00000317173 TLN1Q9Y490 2541 aaKnown RBP12.82□□□□□ -0.36
MSRA-201ENST00000317173 FASNP49327 2511 aaKnown RBP12.82□□□□□ -0.36
MSRA-201ENST00000317173 A0A087WUU8 490 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 MKRN2OSH3BPM6 223 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 OR10H3O60404 316 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 CDC40O60508 579 aaKnown RBP eCLIP12.82□□□□□ -0.36
MSRA-201ENST00000317173 P04436 131 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 CCL3P10147 92 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 PRKACGP22612 351 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 CBLP22681 906 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 SLC1A3P43003 542 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 DAPP51397 102 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 DLX5P56178 289 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 MFAP5Q13361 173 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 LAPTM4AQ15012 233 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 SEC23BQ15437 767 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 ZNF468Q5VIY5 522 aaPredicted RBP12.82□□□□□ -0.36
MSRA-201ENST00000317173 C1orf94Q6P1W5 598 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 ZNF730Q6ZMV8 503 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 MBOAT2Q6ZWT7 520 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 NKAIN4Q8IVV8 208 aa12.82□□□□□ -0.36
MSRA-201ENST00000317173 OR4K5Q8NGD3 323 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms