RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 EPYCQ99645 322 aa10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 C20orf24Q9BUV8 137 aa10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 SUV39H2Q9H5I1 410 aa10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 MRPS30Q9NP92 439 aaKnown RBP10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 FBXL3Q9UKT7 428 aa10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 NUP210Q8TEM1 1887 aaPredicted RBP10.9□□□□□ -0.67
LDLRAD3-201ENST00000315571 RTCAO00442 366 aaKnown RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 CLDN4O14493 209 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 YIF1AO95070 293 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PSMB1P20618 241 aaKnown RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 DLX5P56178 289 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 KCNJ10P78508 379 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 IRF8Q02556 426 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 DUOXA1Q1HG43 343 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 C18orf21Q32NC0 220 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 AKR1C8PQ5T2L2 129 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 MEDAGQ5VYS4 303 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 CARFQ8N187 725 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR9A2Q8NGT5 310 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ISOC2Q96AB3 205 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 C14orf144Q96I85 54 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ATF6BQ99941 703 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 KCNH6Q9H252 994 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PRDM6Q9NQX0 595 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 SLC25A13Q9UJS0 675 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 FBXL21Q9UKT6 434 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAM170BA6NMN3 283 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR7A17O14581 309 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 SNAPC5O75971 98 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 IFNA17P01571 189 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 IL9P15248 144 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 GJA4P35212 333 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR8G1Q15617 311 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAM189A2Q15884 450 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 FAHD1Q6P587 224 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 UNQ6126/PRO20091Q6UXV3 157 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ESPNLQ6ZVH7 1005 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 SKA3Q8IX90 412 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 KLHDC8BQ8IXV7 354 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 C10orf111Q8N326 155 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 HHIPQ96QV1 700 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 DOHHQ9BU89 302 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 SLC52A3Q9NQ40 469 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 GAR1Q9NY12 217 aaKnown RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 OTOL1A6NHN0 477 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ASGR2P07307 311 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PBLDP30039 288 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 DDTP30046 118 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 BATFQ16520 125 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 NKAPLQ5M9Q1 402 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 HEPHL1Q6MZM0 1159 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 KLBQ86Z14 1044 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 NKAPQ8N5F7 415 aaKnown RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 ZNF433Q8N7K0 673 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 NANOGP1Q8N7R0 232 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 TSPAN10Q9H1Z9 355 aaPredicted RBP10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 CRLF2Q9HC73 371 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 CTPS2Q9NRF8 586 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 GPR52Q9Y2T5 361 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PCDHGC4Q9Y5F7 938 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PCDHGA5Q9Y5G8 931 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 PCDHGA1Q9Y5H4 931 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR51B4Q9Y5P0 310 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 DOCK8Q8NF50 2099 aa10.89□□□□□ -0.67
LDLRAD3-201ENST00000315571 SZT2Q5T011 3432 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 PRKYO43930 277 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 IGFBP1P08833 259 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 GIPP09681 153 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 SPI1P17947 270 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 TSPAN7P41732 249 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 SLC6A11P48066 632 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 RNF151Q2KHN1 245 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 LIPNQ5VXI9 398 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 APOOLQ6UXV4 268 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 BEST3Q8N1M1 668 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR8J1Q8NGP2 316 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 GABARAPL3Q9BY60 117 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 OR2S2Q9NQN1 319 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 TBC1D3BA6NDS4 549 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 GABRPO00591 440 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 PRAF2O60831 178 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 S1PR4O95977 384 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 CH25HO95992 272 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 IFNA10P01566 189 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 EIF4EP06730 217 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 CEBPGP53567 150 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 RPS27AP62979 156 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 UBA52P62987 128 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 MRPS10P82664 201 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 AIMP2Q13155 320 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 DCST1Q5T197 706 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 TMED4Q7Z7H5 227 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 SIDT2Q8NBJ9 832 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 INO80EQ8NBZ0 244 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 HAVCR2Q8TDQ0 301 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 ALG14Q96F25 216 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 MISP3Q96FF7 219 aa10.88□□□□□ -0.67
LDLRAD3-201ENST00000315571 TLNRD1Q9H1K6 362 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms