RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 DMRT3Q9NQL9 472 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 AK6Q9Y3D8 172 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 A0A1B0GW55 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 A0A1W2PRU2 124 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 CPSF4LA6NMK7 179 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 J3QLW9 94 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 CDC123O75794 336 aaPredicted RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 EIF3GO75821 320 aaKnown RBP eCLIP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 MRPL3P09001 348 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L2P0CJ85 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L3P0CJ86 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L4P0CJ87 422 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L5P0CJ88 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L6P0CJ89 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4L7P0CJ90 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF19P17023 458 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 GABRR2P28476 465 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 TSPAN31Q12999 210 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF626Q68DY1 528 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SLC6A19Q695T7 634 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZC3H14Q6PJT7 736 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 HTR3DQ70Z44 454 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 C7orf61Q8IZ16 206 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 PUSL1Q8N0Z8 303 aaKnown RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF740Q8NDX6 193 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 LGALS14Q8TCE9 139 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 SFT2D1Q8WV19 159 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF689Q96CS4 500 aaPredicted RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 TIMP4Q99727 224 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 TTTY10Q9BZA0 68 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 TINAGL1Q9GZM7 467 aaPredicted RBP16.76■□□□□ 0.27
SPSB4-201ENST00000310546 FN3KQ9H479 309 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 DUX4Q9UBX2 424 aa16.76■□□□□ 0.27
SPSB4-201ENST00000310546 NUMA1Q14980 2115 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 COL4A6Q14031 1691 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 SCN8AQ9UQD0 1980 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 ABHD14A-ACY1A0A1B0GW23 586 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 HMSDA8MTL9 139 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 TGM5O43548 720 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 TBL1XO60907 577 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 H2AFB1P0C5Y9 115 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 EPXP11678 715 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 TYRP14679 529 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 STARP49675 285 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 MAT1AQ00266 395 aaKnown RBP16.75■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF704Q6ZNC4 412 aaPredicted RBP16.75■□□□□ 0.27
SPSB4-201ENST00000310546 CCDC36Q8IYA8 594 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 CMTM4Q8IZR5 234 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 OR1M1Q8NGA1 313 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 PNPLA2Q96AD5 504 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 CRB3Q9BUF7 120 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 TAS2R5Q9NYW4 299 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 MYOFQ9NZM1 2061 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 EPPINO95925 133 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 BDH1Q02338 343 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 FAM109BQ6ICB4 259 aaPredicted RBP16.75■□□□□ 0.27
SPSB4-201ENST00000310546 C11orf88Q6PI97 169 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 LDLRAD3Q86YD5 345 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 CBARPQ8N350 705 aaPredicted RBP16.75■□□□□ 0.27
SPSB4-201ENST00000310546 TCEAL4Q96EI5 215 aa16.75■□□□□ 0.27
SPSB4-201ENST00000310546 ANTXRLA6NF34 631 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 RTCAO00442 366 aaKnown RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 GSTZ1O43708 216 aaPredicted RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 RB1P06400 928 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 SAGP10523 405 aaPredicted RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 IFNGR2P38484 337 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 GMFBP60983 142 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 SMAD2Q15796 467 aaKnown RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 SYTL3Q4VX76 610 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 ADGRF1Q5T601 910 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF783Q6ZMS7 281 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 EXOSC8Q96B26 276 aaKnown RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 ZNF275Q9NSD4 429 aaPredicted RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 NPFFR2Q9Y5X5 522 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 FAM25EA8MYX2 175 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 GOSR2O14653 212 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 NDUFS6O75380 124 aaKnown RBP16.74■□□□□ 0.27
SPSB4-201ENST00000310546 STX11O75558 287 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 SNAPC5O75971 98 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 STC2O76061 302 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 PTGER1P34995 402 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 PRKAG1P54619 331 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 GUCA2BQ16661 112 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 OR7E24Q6IFN5 339 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 GHSRQ92847 366 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 OSTF1Q92882 214 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 C4orf36Q96KX1 117 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 DERL3Q96Q80 235 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 NDC1Q9BTX1 674 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 SLC25A32Q9H2D1 315 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 P2RX2Q9UBL9 471 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 PLEKHM1Q9Y4G2 1056 aa16.74■□□□□ 0.27
SPSB4-201ENST00000310546 YKT6O15498 198 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 ABLIM3O94929 683 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 ATP1B1P05026 303 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 PPP2R1BP30154 601 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 DCTDP32321 178 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 DLX5P56178 289 aa16.73■□□□□ 0.27
SPSB4-201ENST00000310546 SORDQ00796 357 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms