RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CSNK1DP48730 415 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SPEM2Q0P670 501 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TCTE1Q5JU00 501 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TIGD3Q6B0B8 471 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ADGRG5Q8IZF4 528 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TMEM156Q8N614 296 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 OR52B6Q8NGF0 335 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SAMD8Q96LT4 415 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PRAP1Q96NZ9 151 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ST6GALNAC5Q9BVH7 336 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 BTBD2Q9BX70 525 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 HAPLN2Q9GZV7 340 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TM7SF3Q9NS93 570 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 RIMS3Q9UJD0 308 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 LIPT1Q9Y234 373 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 POLHQ9Y253 713 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ARAP2Q8WZ64 1704 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 G3V2L1 256 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ADAM10O14672 748 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ADORA3P0DMS8 318 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 C1GALT1C1LP0DN25 315 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TYRP1P17643 537 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PPT1P50897 306 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SGSHP51688 502 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 RAP2BP61225 183 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TMEM115Q12893 351 aaPredicted RBP7.68□□□□□ -1.18
VPS41-202ENST00000310301 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 C18orf63Q68DL7 685 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 LILRA6Q6PI73 481 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 LACC1Q8IV20 430 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 DNAJC22Q8N4W6 341 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 OR51T1Q8NGJ9 327 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FNDC9Q8TBE3 224 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 MUL1Q969V5 352 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 KCNK13Q9HB14 408 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 RASD1Q9Y272 281 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 CBY1Q9Y3M2 126 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ENPP4Q9Y6X5 453 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 A0A0D9SG52 128 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 HHLA1C9JL84 531 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 NCR1O76036 304 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SELPLGQ14242 412 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 RPS26P11Q5JNZ5 115 aaPredicted RBP7.68□□□□□ -1.18
VPS41-202ENST00000310301 PDSS1Q5T2R2 415 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 STEAP4Q687X5 459 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SLC18B1Q6NT16 456 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 APOOLQ6UXV4 268 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 Q6ZNX1 250 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 RFPL4BQ6ZWI9 263 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 NRMQ8IXM6 262 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 OR1S1Q8NH92 325 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 L3HYPDHQ96EM0 354 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TMEM19Q96HH6 336 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ZNF681Q96N22 645 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 G6PC3Q9BUM1 346 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SLC19A3Q9BZV2 496 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 CHRDQ9H2X0 955 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 GPRC5BQ9NZH0 403 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TESQ9UGI8 421 aaKnown RBP7.68□□□□□ -1.18
VPS41-202ENST00000310301 SRPK3Q9UPE1 567 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 ENTPD2Q9Y5L3 495 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 R4GN57 208 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FBXO24O75426 580 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PPP1R3DO95685 299 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PKLRP30613 574 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FASLGP48023 281 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 GTDC1Q4AE62 458 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 DCAF12Q5T6F0 453 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 LYPD4Q6UWN0 246 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 DPPA2Q7Z7J5 298 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PXT1Q8NFP0 134 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 LUZP4Q9P127 313 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 CLDN24A6NM45 220 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 EFCAB7A8K855 629 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TFAP2AP05549 437 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 GM2AP17900 193 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 MMP12P39900 470 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FGF14Q92915 247 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 SDSLQ96GA7 329 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 MRGPRX2Q96LB1 330 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 TRIB3Q96RU7 358 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 PITHD1Q9GZP4 211 aaPredicted RBP7.68□□□□□ -1.18
VPS41-202ENST00000310301 PTTG3PQ9NZH4 202 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 FBXL2Q9UKC9 423 aa7.68□□□□□ -1.18
VPS41-202ENST00000310301 POLR2AP24928 1970 aaKnown RBP7.68□□□□□ -1.18
VPS41-202ENST00000310301 MAGEB4O15481 346 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 TRAPPC6AO75865 159 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 HEXBP07686 556 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 MSX1P28360 303 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 MRPS10P82664 201 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 RBM39Q14498 530 aaKnown RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 P2RY14Q15391 338 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 C18orf21Q32NC0 220 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 YIF1BQ5BJH7 314 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 TMEM184AQ6ZMB5 413 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 LRRC28Q86X40 367 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 CPOQ8IVL8 374 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 OR51D1Q8NGF3 324 aa7.67□□□□□ -1.18
VPS41-202ENST00000310301 ZNF578Q96N58 590 aaPredicted RBP7.67□□□□□ -1.18
VPS41-202ENST00000310301 HINT2Q9BX68 163 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms