RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SLCO1B3Q9NPD5 702 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 EXOSC3Q9NQT5 275 aaKnown RBP23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 CLEC4AQ9UMR7 237 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 TESMINQ9Y4I5 508 aa23.65■■□□□ 1.38
CDKN2A-201ENST00000304494 FAM234BA2RU67 622 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 C16orf97H3BN30 126 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 NR2F1P10589 423 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 UGT2B10P36537 528 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 GNA13Q14344 377 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 COX20Q5RI15 118 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 DNAJC14Q6Y2X3 702 aaPredicted RBP23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 CMIPQ8IY22 773 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 ANKFN1Q8N957 763 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 RNF128Q8TEB7 428 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 ZNF524Q96C55 264 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 SLC38A1Q9H2H9 487 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 MTHFD2LQ9H903 347 aaPredicted RBP23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 FANCFQ9NPI8 374 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 ACER3Q9NUN7 267 aa23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 INTS9Q9NV88 658 aaKnown RBP23.64■■□□□ 1.37
CDKN2A-201ENST00000304494 NID1P14543 1247 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 H2AFXP16104 143 aaPredicted RBP23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 MRPL19P49406 292 aaKnown RBP23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 SESN3P58005 492 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 ARFGAP2Q8N6H7 521 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 OR9I1Q8NGQ6 314 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 ZNF563Q8TA94 476 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 ROBO4Q8WZ75 1007 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 ZG16BQ96DA0 208 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 SRXN1Q9BYN0 137 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 COQ10BQ9H8M1 238 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 GP6Q9HCN6 339 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 P2RX2Q9UBL9 471 aa23.63■■□□□ 1.37
CDKN2A-201ENST00000304494 AGAP5A6NIR3 686 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 CHRM4P08173 479 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 AGTR1P30556 359 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 IDH3AP50213 366 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 PPP2R2AP63151 447 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 MERTKQ12866 999 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 TESK1Q15569 626 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 C6orf10Q5SRN2 563 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 STK32CQ86UX6 486 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 SLC25A43Q8WUT9 341 aaPredicted RBP23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 VPS33AQ96AX1 596 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 MED18Q9BUE0 208 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 CCDC28BQ9BUN5 200 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 QRSL1Q9H0R6 528 aaKnown RBP23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 SLC6A13Q9NSD5 602 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 THUMPD1Q9NXG2 353 aaKnown RBP23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 ZNF226Q9NYT6 803 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 ST6GALNAC2Q9UJ37 374 aa23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 SPIN1Q9Y657 262 aaPredicted RBP23.62■■□□□ 1.37
CDKN2A-201ENST00000304494 APOBEC1P41238 236 aaKnown RBP23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 CRATP43155 626 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 RAC3P60763 192 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 EXOC3L2Q2M3D2 409 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 TMEM201Q5SNT2 666 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 PLEKHM3Q6ZWE6 761 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 FCRLAQ7L513 359 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 HMGN2P46Q86SG4 172 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 SLC43A2Q8N370 569 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 WFIKKN1Q96NZ8 548 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 TPT1P8Q9HAU6 139 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 KLHL28Q9NXS3 571 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 CALML5Q9NZT1 146 aa23.61■■□□□ 1.37
CDKN2A-201ENST00000304494 PRKD3O94806 890 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 HRGP04196 525 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 DBIP07108 87 aaKnown RBP23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 IL7RP16871 459 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 RYKP34925 604 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 MVDP53602 400 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 AQP5P55064 265 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 BEND4Q6ZU67 534 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 PEX5LQ8IYB4 626 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 ABHD3Q8WU67 409 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 WDR60Q8WVS4 1066 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 OR5B2Q96R09 309 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 TACO1Q9BSH4 297 aaKnown RBP23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 KLHL13Q9P2N7 655 aa23.6■■□□□ 1.37
CDKN2A-201ENST00000304494 A0A1W2PNR3 127 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 CLDN24A6NM45 220 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 BCAS1O75363 584 aaPredicted RBP23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 CD1EP15812 388 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 RPS4Y1P22090 263 aaKnown RBP23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 DNASE1P24855 282 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 FKBP2P26885 142 aaKnown RBP23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 CCKARP32238 428 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 IST1P53990 364 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 DSTNP60981 165 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 IRX1P78414 480 aaPredicted RBP23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 SPNS3Q6ZMD2 512 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 GRINAQ7Z429 371 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 GTF2H4Q92759 462 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 EBF4Q9BQW3 602 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 CCDC106Q9BWC9 280 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 KLHL4Q9C0H6 718 aa23.59■■□□□ 1.37
CDKN2A-201ENST00000304494 CCDC168Q8NDH2 2452 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 TMEM247A6NEH6 219 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 ETFAP13804 333 aa23.58■■□□□ 1.37
CDKN2A-201ENST00000304494 ART1P52961 327 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms