RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ZNF559Q9BR84 538 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 HRH4Q9H3N8 390 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 CORO2BQ9UQ03 480 aa13.41□□□□□ -0.26
CDT1-201ENST00000301019 A0A087WUU8 490 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 UBE2QL1A1L167 161 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 STMND1H3BQB6 276 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PAK4O96013 591 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 ACTL6AO96019 429 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PRG2P13727 222 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 NDUFB7P17568 137 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 RAP2BP61225 183 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PLA2G7Q13093 441 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 CDC73Q6P1J9 531 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 CXXC5Q7LFL8 322 aaKnown RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 OR2W3Q7Z3T1 314 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 SERINC5Q86VE9 423 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 POP5Q969H6 163 aaKnown RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 SAMD8Q96LT4 415 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 TEFMQ96QE5 360 aaKnown RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 NAA11Q9BSU3 229 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 A4GNTQ9UNA3 340 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 CXorf65A6NEN9 183 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 C1orf196B1AJZ1 125 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 F5H0A9 414 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 GAPDHSO14556 408 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 GPR37O15354 613 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 SMAD6O43541 496 aaKnown RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 TXNDC12O95881 172 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 SLC16A8O95907 504 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 EPXP11678 715 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 ZNF14P17017 642 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 KCNJ5P48544 419 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 ZNF630Q2M218 657 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 SLC29A4Q7RTT9 530 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 RGP1Q92546 391 aaPredicted RBP13.4□□□□□ -0.26
CDT1-201ENST00000301019 SCAMP4Q969E2 229 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 ZNF354BQ96LW1 612 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PRO1933Q9H354 126 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 REEP4Q9H6H4 257 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 SPG21Q9NZD8 308 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PLEKHA6Q9Y2H5 1048 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 PCDHGA1Q9Y5H4 931 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 BACE2Q9Y5Z0 518 aa13.4□□□□□ -0.26
CDT1-201ENST00000301019 TMEM218A2RU14 115 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 TNFRSF10BO14763 440 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 UBL3O95164 117 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 ARAFP10398 606 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 NME1P15531 152 aaKnown RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 PPIBP23284 216 aaKnown RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 ACRV1P26436 265 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 CAP1Q01518 475 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 DEFA6Q01524 100 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 MINDY4Q4G0A6 757 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 GLDNQ6ZMI3 551 aaPredicted RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 NEIL2Q969S2 332 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 SUCNR1Q9BXA5 334 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 PDFQ9HBH1 243 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 MPTX1A8MV57 137 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 TIA1P31483 386 aaKnown RBP eCLIP13.39□□□□□ -0.27
CDT1-201ENST00000301019 ATP5C1P36542 298 aaKnown RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 AQP2P41181 271 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 GCGRP47871 477 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 PGDP52209 483 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 SP3Q02447 781 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 PRKCZQ05513 592 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 SYTL3Q4VX76 610 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 SLC22A10Q63ZE4 541 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 ADAM5Q6NVV9 412 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 TMEM86AQ8N2M4 240 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 MYLIPQ8WY64 445 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 BRD9Q9H8M2 597 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 NPDC1Q9NQX5 325 aaPredicted RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 SYT5O00445 386 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 ST8SIA5O15466 376 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 TGM6O95932 706 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 GIPP09681 153 aaPredicted RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 DDX6P26196 483 aaKnown RBP eCLIP13.39□□□□□ -0.273e-7■■□□□ 14.1
CDT1-201ENST00000301019 NTSP30990 170 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 GPX4P36969 197 aaPredicted RBP13.39□□□□□ -0.27
CDT1-201ENST00000301019 GUCA2AQ02747 115 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 MAMSTRQ6ZN01 415 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 NUDT18Q6ZVK8 323 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 HTR3DQ70Z44 454 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 SSX9Q7RTT3 188 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 NKAIN4Q8IVV8 208 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 THEM6Q8WUY1 208 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 KCNK15Q9H427 330 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 OR2S2Q9NQN1 319 aa13.39□□□□□ -0.27
CDT1-201ENST00000301019 hCG_1809904A0A1W2PP81 198 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 A0A1W2PR64 198 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 A0A1W2PRV1 198 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 LCMT2O60294 686 aaKnown RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 NAA10P41227 235 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 HABP2Q14520 560 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 FNDC3BQ53EP0 1204 aaKnown RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 CCDC157Q569K6 752 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 B3GNTL1Q67FW5 361 aaPredicted RBP13.38□□□□□ -0.27
CDT1-201ENST00000301019 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 NRMQ8IXM6 262 aa13.38□□□□□ -0.27
CDT1-201ENST00000301019 WDSUB1Q8N9V3 476 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms