RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ANKK1Q8NFD2 765 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 TNFRSF13CQ96RJ3 184 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 CDCA4Q9BXL8 241 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZBTB20Q9HC78 741 aaPredicted RBP23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 RPS6KB2Q9UBS0 482 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 RPL36Q9Y3U8 105 aaKnown RBP23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 VSTM2BA6NLU5 285 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 IL12BP29460 328 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 EMP2P54851 167 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 CTBP2P56545 445 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 MED22Q15528 200 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 P2RY8Q86VZ1 359 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 OR2T33Q8NG76 320 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 OR5M3Q8NGP4 307 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 ART5Q96L15 291 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 MED20Q9H944 212 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 GPN2Q9H9Y4 310 aaPredicted RBP23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC35A3Q9Y2D2 325 aa23.49■■□□□ 1.35
SDCCAG3-201ENST00000298537 PMS2P1A4D2B8 440 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 EFCAB9A8MZ26 197 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 KHNYNO15037 678 aaKnown RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 GABARAPO95166 117 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 PIPP12273 146 aaPredicted RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 SOWAHCQ53LP3 525 aaPredicted RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 BMP8AQ7Z5Y6 402 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 OR52I1Q8NGK6 324 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 NDNFQ8TB73 568 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC38A2Q96QD8 506 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 KRCC1Q9NPI7 259 aaPredicted RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 BHLHE40O14503 412 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 TOMM34Q15785 309 aaPredicted RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC25A30Q5SVS4 291 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 PAPD4Q6PIY7 484 aaKnown RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC34A3Q8N130 599 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZNF527Q8NB42 609 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 BRIX1Q8TDN6 353 aaKnown RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 OTULINQ96BN8 352 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 LGALS12Q96DT0 336 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 HCAR1Q9BXC0 346 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 HINT3Q9NQE9 182 aaKnown RBP23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 PCNX3Q9H6A9 2034 aa23.48■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZC3H12DA2A288 527 aaKnown RBP23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 GTPBP1O00178 669 aaKnown RBP23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 GRK6P43250 576 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZNF117Q03924 483 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 AGBL5Q8NDL9 886 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 DNAJA3Q96EY1 480 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 TMEM80Q96HE8 168 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 CRB3Q9BUF7 120 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 IGKV1D-42A0A075B6H8 117 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 FAM86C2PA6NEL3 165 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 ZNF264O43296 627 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 PTP4A3O75365 173 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 SF3A2Q15428 464 aaKnown RBP23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 ARMCX4Q5H9R4 360 aa23.47■■□□□ 1.35
SDCCAG3-201ENST00000298537 A0A087WUJ7 227 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 SAGE2PA6NJ88 616 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 SOCS6O14544 535 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 TO15178 435 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 COPZ1P61923 177 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 DCAF7P61962 342 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 AADACL4Q5VUY2 407 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 MRPL14Q6P1L8 145 aaKnown RBP23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 IGFN1Q86VF2 1251 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 CDK20Q8IZL9 346 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 CLDN22Q8N7P3 220 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 RNFT2Q96EX2 444 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 DEPDC7Q96QD5 511 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 HOXD1Q9GZZ0 328 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 RNF167Q9H6Y7 350 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 MCCC2Q9HCC0 563 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 MPDZO75970 2070 aa23.46■■□□□ 1.35
SDCCAG3-201ENST00000298537 ADH7P40394 386 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 DBX2Q6ZNG2 339 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 OAFQ86UD1 273 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 CPOQ8IVL8 374 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 SLC35B4Q969S0 331 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 RELTQ969Z4 430 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 IFT27Q9BW83 186 aa23.45■■□□□ 1.35
SDCCAG3-201ENST00000298537 TMEM200CA6NKL6 621 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 KDM4EB2RXH2 506 aaPredicted RBP23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 WWP2O00308 870 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 PRODHO43272 600 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 SCO2O43819 266 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 CPNE3O75131 537 aaKnown RBP23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 GADD45AP24522 165 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 ETV5P41161 510 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 SLC9A3P48764 834 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 ETV1P50549 477 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 MEDAGQ5VYS4 303 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 METTL21AQ8WXB1 218 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 FCGR1BQ92637 280 aa23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 LSM2Q9Y333 95 aaKnown RBP23.45■■□□□ 1.34
SDCCAG3-201ENST00000298537 C2orf72A6NCS6 295 aa23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 HCRTR2O43614 444 aa23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 CSO75390 466 aaKnown RBP23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 PPP1R3DO95685 299 aa23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 ROR2Q01974 943 aaKnown RBP23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 IL11RAQ14626 422 aa23.44■■□□□ 1.34
SDCCAG3-201ENST00000298537 ZFAND2BQ8WV99 257 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms