RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 APOOLQ6UXV4 268 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 HSDL2Q6YN16 418 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 WDR36Q8NI36 951 aaKnown RBP14.27□□□□□ -0.13
LSM6-201ENST00000296581 NUBPLQ8TB37 319 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 TMEM239Q8WW34 195 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 MR1Q95460 341 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 OMA1Q96E52 524 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 ZNF426Q9BUY5 554 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 EXOSC3Q9NQT5 275 aaKnown RBP14.27□□□□□ -0.13
LSM6-201ENST00000296581 CNIH4Q9P003 139 aa14.27□□□□□ -0.13
LSM6-201ENST00000296581 HPGDP15428 266 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 JUNBP17275 347 aaPredicted RBP14.26□□□□□ -0.13
LSM6-201ENST00000296581 ABCD3P28288 659 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 IL12BP29460 328 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 ETV5P41161 510 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 ISXQ2M1V0 245 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 KCTD8Q6ZWB6 473 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 MEX3DQ86XN8 651 aaKnown RBP14.26□□□□□ -0.13
LSM6-201ENST00000296581 P3H2Q8IVL5 708 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 SPARTQ8N0X7 666 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 AMER2Q8N7J2 671 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 OR8K3Q8NH51 312 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 CAPSLQ8WWF8 208 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 ARSGQ96EG1 525 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 HS6ST2Q96MM7 605 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 SLC25A19Q9HC21 320 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 B3GALT1Q9Y5Z6 326 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 HEATR5AQ86XA9 2040 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 LOC102723996A0A087X1L8 192 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 TRIM64BA6NI03 449 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 C9J4A7 227 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 FAM20BO75063 409 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 ICOSLGO75144 302 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 DCKP27707 260 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 SLC26A5P58743 744 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 CDK5Q00535 292 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 PRKCDQ05655 676 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 SKP2Q13309 424 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 DCAF12Q5T6F0 453 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 LINC00114Q6XXX2 140 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 CCDC81Q6ZN84 652 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 LIN37Q96GY3 246 aaPredicted RBP14.26□□□□□ -0.13
LSM6-201ENST00000296581 NODALQ96S42 347 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
LSM6-201ENST00000296581 A0A1W2PQD3 144 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 C4orf47A7E2U8 309 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PTGES3LE9PB15 166 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 M0R129 80 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 MRPS14O60783 128 aaKnown RBP14.25□□□□□ -0.13
LSM6-201ENST00000296581 CRYZL1O95825 349 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 RBM34P42696 430 aaKnown RBP14.25□□□□□ -0.13
LSM6-201ENST00000296581 GIPRP48546 466 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 TPTEP56180 551 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 SNRPGP62308 76 aaKnown RBP14.25□□□□□ -0.13
LSM6-201ENST00000296581 NCF4Q15080 339 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CSRP2Q16527 193 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CCDC157Q569K6 752 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 ULK3Q6PHR2 472 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 KIRREL2Q6UWL6 708 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CLDN22Q8N7P3 220 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 GALNT6Q8NCL4 622 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 GRHL3Q8TE85 626 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 IPCEF1Q8WWN9 437 aaPredicted RBP14.25□□□□□ -0.13
LSM6-201ENST00000296581 ZPBPQ9BS86 351 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PLA2G12AQ9BZM1 189 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 DSN1Q9H410 356 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 POLR1BQ9H9Y6 1135 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CCNB1IP1Q9NPC3 277 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PCDHGA1Q9Y5H4 931 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 EXPH5Q8NEV8 1989 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CENPBD1B2RD01 187 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 KLF7O75840 302 aaPredicted RBP14.25□□□□□ -0.13
LSM6-201ENST00000296581 GPR4P46093 362 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 CTBP2P56545 445 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PIGFQ07326 219 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 GINS1Q14691 196 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 XAF1Q6GPH4 301 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 DESI1Q6ICB0 168 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PTCHD4Q6ZW05 846 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 RAB11FIP2Q7L804 512 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 MRGPREQ86SM8 312 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 ZBTB46Q86UZ6 589 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 SLC38A6Q8IZM9 456 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 OR8D4Q8NGM9 314 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 C8orf44Q96CB5 159 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 SIGLEC11Q96RL6 698 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 EGLN3Q9H6Z9 239 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 IL20Q9NYY1 176 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 PCDHGB1Q9Y5G3 927 aa14.25□□□□□ -0.13
LSM6-201ENST00000296581 TEX51A0A1B0GUA7 166 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 OR6C70A6NIJ9 312 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ALG1L2C9J202 215 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ZNF264O43296 627 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 OIP5O43482 229 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 UMODP07911 640 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 CCDC58Q4VC31 144 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ALG10BQ5I7T1 473 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 TMEM201Q5SNT2 666 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 CASP12Q6UXS9 341 aa14.24□□□□□ -0.13
LSM6-201ENST00000296581 ZNF620Q6ZNG0 422 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms