RNA–Protein interactions for RNA: ENST00000295225.9

KCNIP3-201, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best) BASIC

Gene KCNIP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-201ENST00000295225 TGM3Q08188 693 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 GXYLT1Q4G148 440 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 C1orf94Q6P1W5 598 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 RFLNBQ8N5W9 214 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 KDF1Q8NAX2 398 aaPredicted RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 TMEM163Q8TC26 289 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 UFD1Q92890 307 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 MS4A6EQ96DS6 147 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 RBCK1Q9BYM8 510 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 SLC22A4Q9H015 551 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 RNF121Q9H920 327 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 STARD5Q9NSY2 213 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 MCUBQ9NWR8 336 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 PLCL2Q9UPR0 1127 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 PCDHGB2Q9Y5G2 931 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 BRWD1Q9NSI6 2320 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 PDE9AO76083 593 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 UBXN7O94888 489 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 SRPRAP08240 638 aaKnown RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 ACP2P11117 423 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 RAB3AP20336 220 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 SHC1P29353 583 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 GPLD1P80108 840 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 TFF2Q03403 129 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 ZNF155Q12901 538 aaPredicted RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 CDK10Q15131 360 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 IRF4Q15306 451 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 GAB4Q2WGN9 574 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 DEFB134Q4QY38 66 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 TRMT12Q53H54 448 aaKnown RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 C2orf27AQ580R0 203 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 TRIQKQ629K1 86 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 FIGNL1Q6PIW4 674 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 ARL9Q6T311 187 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 ZNF761Q86XN6 746 aaPredicted RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 TMEM99Q8N816 258 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 C19orf18Q8NEA5 215 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 OR7G2Q8NG99 324 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 OR51A7Q8NH64 312 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 BADQ92934 168 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 SLC35A4Q96G79 324 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 MCHR1Q99705 422 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 HDHD2Q9H0R4 259 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 ADAP2Q9NPF8 381 aa12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 USP36Q9P275 1121 aaKnown RBP12.33□□□□□ -0.44
KCNIP3-201ENST00000295225 FAM240BA0A1B0GVZ2 78 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PEX12O00623 359 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 IMPA2O14732 288 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ASGR2P07307 311 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 TFPIP10646 304 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 HIST1H1TP22492 207 aaPredicted RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PEBP1P30086 187 aaKnown RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 AGFG1P52594 562 aaKnown RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 CASP6P55212 293 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 REEP5Q00765 189 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PRDX1Q06830 199 aaKnown RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 MLC1Q15049 377 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 MAPK14Q16539 360 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PLK5Q496M5 336 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 TMEM201Q5SNT2 666 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 MEDAGQ5VYS4 303 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 VASNQ6EMK4 673 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 WDR88Q6ZMY6 472 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 TRIM69Q86WT6 500 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 IZUMO1Q8IYV9 350 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 HDDC3Q8N4P3 179 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 BEST4Q8NFU0 473 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 GRHL3Q8TE85 626 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ZNF707Q96C28 371 aaPredicted RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PRRC1Q96M27 445 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PRDM7Q9NQW5 492 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 MRPL15Q9P015 296 aaKnown RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ASCC3Q8N3C0 2202 aaKnown RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 SEC16AO15027 2179 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 TRAV27A0A087WT01 109 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PRODHO43272 600 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ELK1P19419 428 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 CPN2P22792 545 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 WNT5AP41221 380 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 OCLNQ16625 522 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 TUSC1Q2TAM9 212 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 FAM109BQ6ICB4 259 aaPredicted RBP12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 OR10H4Q8NGA5 316 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 DTD1Q8TEA8 209 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 RNF32Q9H0A6 362 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PTGFRNQ9P2B2 879 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ASB4Q9Y574 426 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 PCDHGA1Q9Y5H4 931 aa12.32□□□□□ -0.44
KCNIP3-201ENST00000295225 ATP5A1P25705 553 aaKnown RBP12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 GCGRP47871 477 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 INPP1P49441 399 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 E2F1Q01094 437 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 EFR3AQ14156 821 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 QPRTQ15274 297 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 SSX2Q16385 188 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 TOR2AQ5JU69 321 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 OTPQ5XKR4 325 aa12.31□□□□□ -0.44
KCNIP3-201ENST00000295225 KIAA1211LQ6NV74 962 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms