RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 NUDT14O95848 222 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 TBXA2RP21731 343 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 PAICSP22234 425 aaKnown RBP16.49■□□□□ 0.23
CAPN1-201ENST00000279247 HLA-BQ31612 363 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 FAM69BQ5VUD6 431 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 AADACL4Q5VUY2 407 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 NIPAL1Q6NVV3 410 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF613Q6PF04 617 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 MAML2Q8IZL2 1156 aaPredicted RBP16.49■□□□□ 0.23
CAPN1-201ENST00000279247 OR6C1Q96RD1 312 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 CDADC1Q9BWV3 514 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 SIGLEC7Q9Y286 467 aa16.49■□□□□ 0.23
CAPN1-201ENST00000279247 PLD2O14939 933 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 LAMTOR5O43504 91 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 LALBAP00709 142 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 WNT4P56705 351 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 PRKCDQ05655 676 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RAB40BQ12829 278 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 INSL4Q14641 139 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 HLA-DQA1Q5Y7H0 255 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 SLC38A9Q8NBW4 561 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ATOH1Q92858 354 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RFKQ969G6 155 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TP53INP1Q96A56 240 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TRIM2Q9C040 744 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 VN1R1Q9GZP7 353 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 AKIP1Q9NQ31 210 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 POLE3Q9NRF9 147 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ADAM18Q9Y3Q7 739 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 C2orf92A0A1B0GVN3 265 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 HMGN1P05114 100 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 LIMS3P0CW19 117 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 LIMS4P0CW20 117 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RPL4P36578 427 aaKnown RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 GAS1P54826 345 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 GPLD1P80108 840 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 FOXK2Q01167 660 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 OR10H4Q8NGA5 316 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 OR4K13Q8NH42 304 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 MED12Q93074 2177 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TMED9Q9BVK6 235 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 NUAK2Q9H093 628 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 GAREM1Q9H706 876 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 SLC35F4A4IF30 521 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 KDM4EB2RXH2 506 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RCBTB2O95199 551 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ITPKBP27987 946 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RORAP35398 523 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RPS25P62851 125 aaKnown RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 CCL7P80098 99 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 SIGLEC14Q08ET2 396 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 CRMP1Q14194 572 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TIMM50Q3ZCQ8 353 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 SYT14Q8NB59 555 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 SDR9C7Q8NEX9 313 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TOR1AIP2Q8NFQ8 470 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 OR4C6Q8NH72 309 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF501Q96CX3 271 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ERMAPQ96PL5 475 aaPredicted RBP16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RTN4RQ9BZR6 473 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 RAB33BQ9H082 229 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 FN3KQ9H479 309 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 ABCB10Q9NRK6 738 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 C14orf105Q9NVL8 296 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 TNFRSF10DQ9UBN6 386 aa16.48■□□□□ 0.23
CAPN1-201ENST00000279247 A0A1B0GX78 115 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 METTL15A6NJ78 407 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 SCDO00767 359 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 CTDSP2O14595 271 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 IMPA2O14732 288 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 POLR1CO15160 346 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-201ENST00000279247 CELP19835 753 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 EPHA8P29322 1005 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-201ENST00000279247 RPS19P39019 145 aaKnown RBP16.47■□□□□ 0.23
CAPN1-201ENST00000279247 SLC1A3P43003 542 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 DSG2Q14126 1118 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF550Q7Z398 422 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 TMEM105Q8N8V8 129 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 HOXB13Q92826 284 aaPredicted RBP16.47■□□□□ 0.23
CAPN1-201ENST00000279247 CTRCQ99895 268 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 KLHL1Q9NR64 748 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 GALNT8Q9NY28 637 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 A0A1W2PQM1 296 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 BHLHE40O14503 412 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 ICOSLGO75144 302 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 UTS2O95399 124 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 CLEC2LP0C7M8 214 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 ZNF141Q15928 474 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 ULK3Q6PHR2 472 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 RNF113BQ8IZP6 322 aaKnown RBP16.47■□□□□ 0.23
CAPN1-201ENST00000279247 B4GALNT2Q8NHY0 566 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 SLC41A2Q96JW4 573 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 DAPK2Q9UIK4 370 aa16.47■□□□□ 0.23
CAPN1-201ENST00000279247 FAM86C2PA6NEL3 165 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 C12orf71A8MTZ7 269 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 PRR23D1E9PI22 279 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 FMO6PO60774 539 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 PRR23D2P0DMB1 279 aaPredicted RBP16.46■□□□□ 0.23
CAPN1-201ENST00000279247 TUBA1BP68363 451 aa16.46■□□□□ 0.23
CAPN1-201ENST00000279247 IFITM3Q01628 133 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms