RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 PKMYT1Q99640 499 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ZNF471Q9BX82 626 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 FOLH1BQ9HBA9 442 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 PARPBPQ9NWS1 579 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 DHCR7Q9UBM7 475 aaKnown RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 H0Y8X5 98 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 FZD6O60353 706 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 TMEM225BP0DP42 221 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 MLLT11Q13015 90 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 PYCR3Q53H96 274 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 NHSL2Q5HYW2 709 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SLC22A10Q63ZE4 541 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SLC37A2Q8TED4 501 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 ZNF442Q9H7R0 627 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 COPZ2Q9P299 210 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 LYRM1O43325 122 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SFTPBP07988 381 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 RPS5P46782 204 aaKnown RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 EEF1A2Q05639 463 aaKnown RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 FAM205BPQ63HN1 556 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 IL17RCQ8NAC3 791 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
CDH3-201ENST00000264012 AGBL5Q8NDL9 886 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 ELP4Q96EB1 424 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 LRRC46Q96FV0 321 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 SYT4Q9H2B2 425 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 FGF21Q9NSA1 209 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 TBC1D29Q9UFV1 150 aa13.05□□□□□ -0.32
CDH3-201ENST00000264012 LOXHD1Q8IVV2 1947 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 ARID1BQ8NFD5 2236 aaPredicted RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 KRBA1A5PL33 1030 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 GGT3PA6NGU5 568 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 AGAP5A6NIR3 686 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SYT5O00445 386 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 RACK1P63244 317 aaKnown RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 PLEKHN1Q494U1 663 aaPredicted RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 OR2G6Q5TZ20 316 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 NAA50Q9GZZ1 169 aaKnown RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 SLC25A18Q9H1K4 315 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 OR10A5Q9H207 317 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 OR10A4Q9H209 315 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SYNPO2LQ9H987 977 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 OLAHQ9NV23 265 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SLC39A1Q9NY26 324 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 RDH8Q9NYR8 311 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 LRIT2A6NDA9 550 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 POM121BA6NF01 834 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 ZNF195O14628 629 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 GALR3O60755 368 aaPredicted RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 UPK1BO75841 260 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 LCATP04180 440 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 DRD5P21918 477 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 IDUAP35475 653 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 UBE2NP61088 152 aaKnown RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 DEFA5Q01523 94 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 GAB1Q13480 694 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SSX6Q7RTT6 188 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 GALNT11Q8NCW6 608 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 HRASLS5Q96KN8 279 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 RANBP3Q9H6Z4 567 aaPredicted RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 NT5DC2Q9H857 520 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 NSG1A0A0A6YYJ2 146 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 ZNF850A8MQ14 1090 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 FTCDNL1E5RQL4 147 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 F5H5K5 113 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 F13BP05160 661 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SLC35E2P0CK97 266 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 ERP29P30040 261 aaKnown RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 PRSS3P35030 304 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 SNU13P55769 128 aaKnown RBP13.04□□□□□ -0.32
CDH3-201ENST00000264012 SPTSSAQ969W0 71 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 TNFRSF12AQ9NP84 129 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 CD93Q9NPY3 652 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 RLIMQ9NVW2 624 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 NDUFAF4Q9P032 175 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 MAB21L2Q9Y586 359 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 PCDHGA3Q9Y5H0 932 aa13.04□□□□□ -0.32
CDH3-201ENST00000264012 TRBV5-4A0A0C4DH59 114 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 TLCD2A6NGC4 264 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 KLK8O60259 260 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 IL7P13232 177 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 CD27P26842 260 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 GNRHRP30968 328 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 VASPP50552 380 aaPredicted RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 SPCS2Q15005 226 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 RSU1Q15404 277 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 MFSD12Q6NUT3 480 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 OPN5Q6U736 354 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 UNQ6126/PRO20091Q6UXV3 157 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ZNF611Q8N823 705 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 SLC16A11Q8NCK7 471 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 EDAQ92838 391 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 COQ10AQ96MF6 247 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.03□□□□□ -0.32
CDH3-201ENST00000264012 AMY2AP04746 511 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 THBS2P35442 1172 aa13.03□□□□□ -0.32
CDH3-201ENST00000264012 ILKQ13418 452 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms