RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 BCKDHBP21953 392 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ETV5P41161 510 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MAGEA12P43365 314 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 RPL34P49207 117 aaKnown RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 E2F1Q01094 437 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 METTL4Q8N3J2 472 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF565Q8N9K5 539 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 OR1E3Q8WZA6 343 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 NR4A3Q92570 626 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CDCA3Q99618 268 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 FGF22Q9HCT0 170 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SLC23A2Q9UGH3 650 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 A0A0A6YYH2 397 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TRAPPC13A5PLN9 417 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 A6NJ64 397 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 DNAJB5O75953 348 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 EEF1A1P68104 462 aaKnown RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CSNK1G2P78368 415 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TCTN1Q2MV58 587 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 OR13C2Q8NGS9 318 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 HAVCR1Q96D42 359 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF578Q96N58 590 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 IL37Q9NZH6 218 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 COL5A3P25940 1745 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 A6NLC8 198 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 HSPB6O14558 160 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SYT7O43581 403 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SELENOFO60613 162 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 C7P10643 843 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 PCSK6P29122 969 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TNFRSF4P43489 277 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 VAMP2P63027 116 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MAB21L1Q13394 359 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 RBMS3Q6XE24 437 aaKnown RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 WFDC8Q8IUA0 241 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TMEM246Q9BRR3 403 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF471Q9BX82 626 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 POT1Q9NUX5 634 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SEC14L4Q9UDX3 406 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SLC7A11Q9UPY5 501 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ARNTLO00327 626 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 LCMT2O60294 686 aaKnown RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 FURINP09958 794 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MTHFD2P13995 350 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 AMY2BP19961 511 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MAPK3P27361 379 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CLDN12P56749 244 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CAMK2DQ13557 499 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 PDSS1Q5T2R2 415 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 VASH1Q7L8A9 365 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 RSC1A1Q92681 617 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MS4A8Q9BY19 250 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 hCG_1807616A0A1W2PRN6 198 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TVP23AA6NH52 213 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 EIF3FO00303 357 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CDK1P06493 297 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 YES1P07947 543 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SLC35D2Q76EJ3 337 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 GIMAP1Q8WWP7 306 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 NMNAT3Q96T66 252 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 TREM1Q9NP99 234 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 H0YJX3 145 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 UGDHO60701 494 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 RBBP9O75884 186 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 IGFBP1P08833 259 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 S1PR1P21453 382 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CTHP32929 405 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 FXYD4P59646 89 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 POU4F2Q12837 409 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CCDC58Q4VC31 144 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 AFMIDQ63HM1 303 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ADAMTSL4Q6UY14 1074 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MAMDC2Q7Z304 686 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 DENND6BQ8NEG7 585 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 SGCDQ92629 289 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF717Q9BY31 904 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 C2orf42Q9NWW7 574 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 UBQLN2Q9UHD9 624 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CBLCQ9ULV8 474 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 MGAT4AQ9UM21 535 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 FAM230AA0A1W2PPH8 454 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 H0YIV9 168 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 NPC1O15118 1278 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CD3GP09693 182 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF806P0C7X5 589 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 GABARAPL2P60520 117 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 PPP2CBP62714 309 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 PPP2CAP67775 309 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 PRDX1Q06830 199 aaKnown RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 COQ5Q5HYK3 327 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 GLT8D1Q68CQ7 371 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 KCTD18Q6PI47 426 aaPredicted RBP4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ZNF454Q8N9F8 522 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 OR8J2Q8NGG1 315 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 UBTD2Q8WUN7 234 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 ALG8Q9BVK2 526 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 NRSN2Q9GZP1 204 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 CUTCQ9NTM9 273 aa4.38□□□□□ -1.71
RAP1B-201ENST00000250559 POLHQ9Y253 713 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms