RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 SSR2P43308 183 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 EPHA4P54764 986 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 GAS6Q14393 721 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 GNMTQ14749 295 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 TMEM41BQ5BJD5 291 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 NHLRC3Q5JS37 347 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 C16orf59Q7L2K0 433 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 BCDIN3DQ7Z5W3 292 aaKnown RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 THOC6Q86W42 341 aaKnown RBP12.08□□□□□ -0.48
VAMP4-201ENST00000236192 BAP18Q8IXM2 172 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 OR56A3Q8NH54 315 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 SLC2A13Q96QE2 648 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 METTL9Q9H1A3 318 aa12.08□□□□□ -0.48
VAMP4-201ENST00000236192 NHLH2Q02577 135 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 PJVKQ0ZLH3 352 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 OR1J1Q8NGS3 322 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 TMED6Q8WW62 240 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 LIN37Q96GY3 246 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 BARHL1Q9BZE3 327 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 PNO1Q9NRX1 252 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 KLHL42Q9P2K6 505 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1B0GTQ1 180 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 RNASET2O00584 256 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 SRPX2O60687 465 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 RPLP1P05386 114 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 SFTPCP11686 197 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 CASP6P55212 293 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ARFRP1Q13795 201 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ABLIM2Q6H8Q1 611 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HORMAD2Q8N7B1 307 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 OR1J2Q8NGS2 313 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 PHOSPHO1Q8TCT1 267 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 PPP1R14AQ96A00 147 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 TRMT2BQ96GJ1 504 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 CNN2Q99439 309 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 OR11A1Q9GZK7 315 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 NMUR1Q9HB89 426 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MAS1P04201 325 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ATXN1LP0C7T5 689 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 RPA2P15927 270 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 AKR1C3P42330 323 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MC1RQ01726 317 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MAGEH1Q9H213 219 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 IL21RQ9HBE5 538 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 PLAC1Q9HBJ0 212 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 EDN3P14138 238 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ITGB7P26010 798 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 KCNJ10P78508 379 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MAP4K2Q12851 820 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MBOAT1Q6ZNC8 495 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MON1AQ86VX9 555 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 OR1S2Q8NGQ3 325 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 SMPDL3BQ92485 455 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MRPS24Q96EL2 167 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 GPER1Q99527 375 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 EFCAB11Q9BUY7 163 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ELL3Q9HB65 397 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 FAM230AA0A1W2PPH8 454 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 A0A1W2PQH9 124 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ASPDHA6ND91 283 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 SLC25A27O95847 323 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 F2P00734 622 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 CDK2P24941 298 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HTR2CP28335 458 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 RPS13P62277 151 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 POLR2LP62875 67 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 CYB5R2Q6BCY4 276 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ABI3BPQ7Z7G0 1075 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 CLEC4DQ8WXI8 215 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 OR5P2Q8WZ92 322 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 WDR89Q96FK6 387 aaPredicted RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 TMEM19Q96HH6 336 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 C4orf36Q96KX1 117 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 HS6ST2Q96MM7 605 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 MOGAT1Q96PD6 335 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 P2RX7Q99572 595 aaKnown RBP12.07□□□□□ -0.48
VAMP4-201ENST00000236192 ACPTQ9BZG2 426 aa12.07□□□□□ -0.48
VAMP4-201ENST00000236192 UPK3BL1B0FP48 263 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 UPK3BL2E5RIL1 263 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 KAT7O95251 611 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 TGFB1P01137 390 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 APEHP13798 732 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 AMD1P17707 334 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NOVP48745 357 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 NCBP2P52298 156 aaKnown RBP eCLIP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 RPP30P78346 268 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 H3F3AP84243 136 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 EBPQ15125 230 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 ZNF239Q16600 458 aaKnown RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 TMCO2Q7Z6W1 182 aaPredicted RBP12.06□□□□□ -0.48
VAMP4-201ENST00000236192 OR52I2Q8NH67 350 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 OR52A5Q9H2C5 316 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 POFUT1Q9H488 388 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
VAMP4-201ENST00000236192 SLC25A37Q9NYZ2 338 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms