RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SPRTNQ9H040 489 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 MEPEQ9NQ76 525 aaPredicted RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TRIM36Q9NQ86 728 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 LRIT1Q9P2V4 623 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 YARS2Q9Y2Z4 477 aaKnown RBP7.62□□□□□ -1.19
VAMP3-201ENST00000054666 MAU2Q9Y6X3 613 aa7.62□□□□□ -1.19
VAMP3-201ENST00000054666 TRDV1A0A1B0GX56 115 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 DAPL1A0PJW8 107 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 NPIPB9F8W1W9 429 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 PPM1BO75688 479 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 PPP1R3DO95685 299 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 CELP19835 753 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 ALAS2P22557 587 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 FGF9P31371 208 aaPredicted RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 TNFSF8P32971 234 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 CD79BP40259 229 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 STARD6P59095 220 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 ACTC1P68032 377 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 ACTA1P68133 377 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 CDC20Q12834 499 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 POU4F2Q12837 409 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 AGAP7PQ5VUJ5 663 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 PTCRAQ6ISU1 281 aaPredicted RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 KIRREL2Q6UWL6 708 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 THSD4Q6ZMP0 1018 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 GPR135Q8IZ08 494 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SIX5Q8N196 739 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SPEM1Q8N4L4 309 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SLC37A3Q8NCC5 494 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 C7orf57Q8NEG2 295 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 FAM83FQ8NEG4 500 aaPredicted RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 OIT3Q8WWZ8 545 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 HTRA1Q92743 480 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 HLA-CQ95604 372 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 TMCO6Q96DC7 493 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SGTBQ96EQ0 304 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 LRFN5Q96NI6 719 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 WDFY2Q96P53 400 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 OR1F2PQ96R84 312 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 HOXD1Q9GZZ0 328 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 OR51V1Q9H2C8 321 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 KCNN2Q9H2S1 579 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 MED20Q9H944 212 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 TBC1D17Q9HA65 648 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 PNO1Q9NRX1 252 aaKnown RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 MRTO4Q9UKD2 239 aaKnown RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 POLHQ9Y253 713 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SF3B6Q9Y3B4 125 aaKnown RBP7.61□□□□□ -1.19
VAMP3-201ENST00000054666 RNF215Q9Y6U7 377 aa7.61□□□□□ -1.19
VAMP3-201ENST00000054666 SCDO00767 359 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 NUDT21O43809 227 aaKnown RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 RFPL3O75679 317 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 NDUFB2O95178 105 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 PEPDP12955 493 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 SDC2P34741 201 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 RORAP35398 523 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CAPZA2P47755 286 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CD97P48960 835 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CSNK1EP49674 416 aaKnown RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CCR4P51679 360 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 AFF3P51826 1226 aaKnown RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 HSD11B2P80365 405 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 FABP5Q01469 135 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 FZD5Q13467 585 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CRMP1Q14194 572 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 KCNAB1Q14722 419 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 WDR45BQ5MNZ6 344 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 LCN1P1Q5VSP4 162 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CD200R1LQ6Q8B3 271 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 MARCH9Q86YJ5 346 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 KLBQ86Z14 1044 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 SLITRK4Q8IW52 837 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 LAX1Q8IWV1 398 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 GPALPP1Q8IXQ4 340 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 OR8H2Q8N162 312 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF615Q8N8J6 731 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 FAM98AQ8NCA5 519 aaKnown RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ZNF485Q8NCK3 441 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 NEIL3Q8TAT5 605 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 EFHD2Q96C19 240 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 TBX5Q99593 518 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 NDC1Q9BTX1 674 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ASB6Q9NWX5 421 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 UCKL1Q9NWZ5 548 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 WNT16Q9UBV4 365 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 TMEM184BQ9Y519 407 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CLDN16Q9Y5I7 305 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 CLCA3PQ9Y6N3 262 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 MN1Q10571 1320 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 IGHV1OR21-1A0A087WYE8 117 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 OR2W5A6NFC9 320 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 GABRPO00591 440 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 GNB5O14775 395 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 BCAT2O15382 392 aaPredicted RBP7.6□□□□□ -1.19
VAMP3-201ENST00000054666 ADAM11O75078 769 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 MT-ND5P03915 603 aa7.6□□□□□ -1.19
VAMP3-201ENST00000054666 NGFRP08138 427 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms