RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr350Q8VFP8 312 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr672Q8VG28 312 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Slc25a37Q920G8 338 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Aaed1Q9D1A0 226 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zc3h8Q9JJ48 305 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Abcb9Q9JJ59 762 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ca14Q9WVT6 337 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Bcl10Q9Z0H7 233 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cd320Q9Z1P5 260 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 RttnQ8R4Y8 2226 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Olfr1076A2AK60 313 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 ItpkbB2RXC2 942 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Zfp949E9Q732 603 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Shisa8J3QNX5 399 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nfkbil1O88995 381 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Eef1a1P10126 462 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tcea1P10711 301 aaKnown RBP8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 ThP24529 498 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nsg2P47759 171 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Klf16P58334 251 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Rgs14P97492 547 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 CrxosQ3UL53 246 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Ag2Q3UPL5 249 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 D13Ertd608eQ3UPR8 151 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dtx4Q6PDK8 616 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 LcorQ6ZPI3 433 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Oog2Q7TPX8 476 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Gpr68Q8BFQ3 365 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Nabp1Q8BGW5 198 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Dcaf12Q8BGZ3 453 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Scn3bQ8BHK2 215 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Lypd4Q8BVP6 246 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn1r28Q8R2C9 302 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pcolce2Q8R4W6 414 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Satb2Q8VI24 733 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Pcdhac1Q91Y10 964 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Tram2Q924Z5 370 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Prl8a9Q9CQ58 241 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Atp6v1g1Q9CR51 118 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Cers4Q9D6J1 393 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 HrgQ9ESB3 525 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 PtgesQ9JM51 153 aa8.03□□□□□ -1.12
Trim39-201ENSMUST00000042717 Vmn2r117K7N6V1 857 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gtpbp1O08582 668 aaKnown RBP8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Sh2d1bO35324 132 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Dync1i2O88487 612 aaKnown RBP8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Lancl1O89112 399 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Mtnd1P03888 318 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cpa3P15089 417 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 ChrneP20782 493 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Serpine1P22777 402 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cdh26P59862 763 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Map3k8Q07174 467 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Klri2Q5DT36 248 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Laptm4aQ60961 233 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fpr-rs7Q71MR7 338 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Lpar4Q8BLG2 370 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Clec2hQ8C1T8 218 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Wdr37Q8CBE3 496 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Eipr1Q8K0G5 386 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr883Q8VF64 309 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr160Q8VGE3 309 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Q9CR55 154 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Clec2gQ9D676 269 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 PgdQ9DCD0 483 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr930Q9EQ99 308 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Abcb10Q9JI39 715 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Heatr5bQ8C547 2070 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 4930595D18RikD3Z642 64 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Vmn2r76E9Q3F5 853 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr730E9Q8M3 318 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 TspearJ3S6Y1 670 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Timp1P12032 205 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 TstP52196 297 aaKnown RBP8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 MplQ08351 625 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fbxo7Q3U7U3 523 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Rab26Q504M8 260 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Bhlha9Q5RJB0 231 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 ShhQ62226 437 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tmem158Q6F5E0 286 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Klhl6Q6V595 619 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Exosc3Q7TQK4 274 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Zik1Q80YP6 463 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Fastkd3Q8BSN9 661 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 GatcQ8CBY0 155 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Q8K039 155 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Rhno1Q8K3A4 235 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gabarapl1Q8R3R8 117 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tubg2Q8VCK3 451 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Olfr649Q8VGW1 312 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Snx4Q91YJ2 450 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Siglec5Q920G3 569 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Zfp810Q99K45 461 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cdca4Q9CWM2 237 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 D10Jhu81eQ9D172 266 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Tmem38bQ9DAV9 292 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 NplQ9DCJ9 320 aa8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Cnot1Q6ZQ08 2375 aaKnown RBP8.02□□□□□ -1.13
Trim39-201ENSMUST00000042717 Ighv1-42A0A0A6YY38 117 aa8.01□□□□□ -1.13
Trim39-201ENSMUST00000042717 Gm20489A2AGH5 449 aa8.01□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 30.1 ms