RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 ANKS4BQ8N8V4 417 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 TAF15Q92804 592 aaKnown RBP eCLIP2.92□□□□□ -1.94
CCDC7-213ENST00000639290 ELP4Q96EB1 424 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 FBXO17Q96EF6 278 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 PDLIM5Q96HC4 596 aaKnown RBP2.92□□□□□ -1.94
CCDC7-213ENST00000639290 FAR2Q96K12 515 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 C3orf30Q96M34 536 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 CPXM1Q96SM3 734 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 FICDQ9BVA6 458 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 SPATA5L1Q9BVQ7 753 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 GPR35Q9HC97 309 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 NRIP3Q9NQ35 241 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 TAS2R3Q9NYW6 316 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 ACTR3BQ9P1U1 418 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 EXTL2Q9UBQ6 330 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 LAMP5Q9UJQ1 280 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 ASF1AQ9Y294 204 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 ARFGEF3Q5TH69 2177 aa2.92□□□□□ -1.94
CCDC7-213ENST00000639290 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 A4D1N5 150 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 URADA6NGE7 173 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SH2D7A6NKC9 451 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR2AG2A6NM03 316 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FAM72CH0Y354 149 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 RRP9O43818 475 aaKnown RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 CALUO43852 315 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 NR3C1P04150 777 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SBK3P0C264 359 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR12D1P0DN82 309 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 KRT4P19013 534 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 HMGCLP35914 325 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 HCAR3P49019 387 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 TCTAP57738 103 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 LCP2Q13094 533 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SP140Q13342 867 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PKP1Q13835 747 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PLA1AQ53H76 456 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 ARL13AQ5H913 290 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FAM72AQ5TYM5 149 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MARC1Q5VT66 337 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FNDC7Q5VTL7 733 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 ABLIM2Q6H8Q1 611 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FAM72DQ6L9T8 149 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 WDR93Q6P2C0 686 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FAM72BQ86X60 149 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 UBQLNLQ8IYU4 475 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 C17orf78Q8N4C9 275 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 LINC01555Q8NAE3 123 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 NUP37Q8NFH4 326 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR4F15Q8NGB8 312 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 RFWD2Q8NHY2 731 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 WIPF2Q8TF74 440 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 ABHD5Q8WTS1 349 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 FIG4Q92562 907 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 NAA11Q9BSU3 229 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MRPL1Q9BYD6 325 aaKnown RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 TINAGL1Q9GZM7 467 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SYNPO2LQ9H987 977 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MAGEF1Q9HAY2 307 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MOCS1Q9NZB8 636 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 NPAP1Q9NZP6 1156 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 IMPACTQ9P2X3 320 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 TRAF3IP3Q9Y228 551 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 AMDHD2Q9Y303 409 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 KLK5Q9Y337 293 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 RNF103-CHMP3A0A140T963 221 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 K7EPI3 171 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 M0QYG6 137 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 WWP2O00308 870 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 CTDSP2O14595 271 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR2C1O95371 312 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 CHRM2P08172 466 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PFKFB1P16118 471 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SLC6A1P30531 599 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 SLC1A3P43003 542 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 CLCN7P51798 805 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MVKQ03426 396 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 COX10Q12887 443 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 BIKQ13323 160 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OASLQ15646 514 aaKnown RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 NKPD1Q17RQ9 610 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 GLYR1Q49A26 553 aaPredicted RBP2.91□□□□□ -1.94
CCDC7-213ENST00000639290 KANK2Q63ZY3 851 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 KLHL10Q6JEL2 608 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 TFAP2EQ6VUC0 442 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 Q6ZT83 130 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 MSANTD1Q6ZTZ1 278 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 ADCK1Q86TW2 530 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PEX5LQ8IYB4 626 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 KLHDC1Q8N7A1 406 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PIK3C3Q8NEB9 887 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 LPCAT1Q8NF37 534 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR8K1Q8NGG5 319 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR5AR1Q8NGP9 310 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR1J4Q8NGS1 313 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 OR5R1Q8NH85 324 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 DUSP19Q8WTR2 217 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 DCUN1D1Q96GG9 259 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 PGAM5Q96HS1 289 aa2.91□□□□□ -1.94
CCDC7-213ENST00000639290 JSRP1Q96MG2 331 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms