RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 NRG3P56975 720 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 RAP2BP61225 183 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ZNF750Q32MQ0 723 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PRAMEF8Q5VWM4 474 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PRAMEF7Q5VXH5 474 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 SHEQ5VZ18 495 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 DMKNQ6E0U4 476 aaPredicted RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 TMEM64Q6YI46 380 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 GLDNQ6ZMI3 551 aaPredicted RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 LGALS14Q8TCE9 139 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 GANCQ8TET4 914 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 OR7D2Q96RA2 312 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 C1QTNF2Q9BXJ5 285 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 TTYH1Q9H313 450 aaPredicted RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 OR52D1Q9H346 318 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 FN3KQ9H479 309 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ANXA2P2A6NMY6 339 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 H7BY64 318 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 AIPO00170 330 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 STX11O75558 287 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ERAL1O75616 437 aaKnown RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 CTSLP07711 333 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 CPN1P15169 458 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 IFNGR1P15260 489 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PYCR1P32322 319 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 ZNF85Q03923 595 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 DUSP2Q05923 314 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 STK11Q15831 433 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ELFN2Q5R3F8 820 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 CMTM4Q8IZR5 234 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 OR6V1Q8N148 313 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 SLAIN1Q8ND83 568 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 VN1R2Q8NFZ6 395 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ZNF671Q8TAW3 534 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 FANK1Q8TC84 345 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 SFXN5Q8TD22 340 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 HMGB4Q8WW32 186 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PRAP1Q96NZ9 151 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 DMRTA2Q96SC8 542 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ENKD1Q9H0I2 346 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 MTG2Q9H4K7 406 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 ZCCHC4Q9H5U6 513 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 PLEKHA1Q9HB21 404 aa13.1□□□□□ -0.31
LDB3-209ENST00000623056 MRPL17Q9NRX2 175 aaKnown RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 PCDHGA9Q9Y5G4 932 aaKnown RBP13.1□□□□□ -0.31
LDB3-209ENST00000623056 MYO10Q9HD67 2058 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 A0A0A6YYD5 115 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 TSPAN11A1L157 253 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 ANTXRLA6NF34 631 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 K7ESM1 405 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 MAN2B1O00754 1011 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 FKTNO75072 461 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 ITGA10O75578 1167 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 RP2O75695 350 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 OR2A4O95047 310 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 PSMB5P28074 263 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 GABRR2P28476 465 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 S100A11P31949 105 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 FXYD6P3P58550 94 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 TGM3Q08188 693 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 COL9A2Q14055 689 aaPredicted RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 GPR68Q15743 365 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 UBE2NLQ5JXB2 153 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 COL13A1Q5TAT6 717 aaPredicted RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 B3GNTL1Q67FW5 361 aaPredicted RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 ATRAIDQ6UW56 229 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 NHLRC1Q6VVB1 395 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 HSD17B13Q7Z5P4 300 aaPredicted RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 ZNF547Q8IVP9 402 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 MEIOBQ8N635 442 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 OR52I2Q8NH67 350 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 KAT2AQ92830 837 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 RAD51AP1Q96B01 352 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 OR2A7Q96R45 310 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 PELOQ9BRX2 385 aaKnown RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 ZNF416Q9BWM5 594 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 DPH1Q9BZG8 443 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 OR51V1Q9H2C8 321 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 EQTNQ9NQ60 294 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 KLHL28Q9NXS3 571 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 ADAM29Q9UKF5 820 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 SLC7A7Q9UM01 511 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 AK6Q9Y3D8 172 aaKnown RBP13.09□□□□□ -0.31
LDB3-209ENST00000623056 INSL5Q9Y5Q6 135 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 KIAA1549LQ6ZVL6 1849 aa13.09□□□□□ -0.31
LDB3-209ENST00000623056 UNC119BA6NIH7 251 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 BHLHE40O14503 412 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 OR5F1O95221 314 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.31
LDB3-209ENST00000623056 ATP1B1P05026 303 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 TYRP1P17643 537 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 ANXA7P20073 488 aaKnown RBP13.08□□□□□ -0.31
LDB3-209ENST00000623056 CALCRP30988 508 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 SSR2P43308 183 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 REEP5Q00765 189 aa13.08□□□□□ -0.31
LDB3-209ENST00000623056 GPNMBQ14956 572 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms