RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 MISPQ8IVT2 679 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 CHERPQ8IWX8 916 aaKnown RBP12.36□□□□□ -0.43
NEK3-210ENST00000620675 OR6T1Q8NGN1 323 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 OR5W2Q8NH69 310 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 VANGL1Q8TAA9 524 aaPredicted RBP12.36□□□□□ -0.43
NEK3-210ENST00000620675 CPT1CQ8TCG5 803 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SLC26A7Q8TE54 656 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SLX1AQ9BQ83 275 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SPATA5L1Q9BVQ7 753 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 CTPS2Q9NRF8 586 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SLC7A8Q9UHI5 535 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SH3GLB1Q9Y371 365 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 ARHGAP21Q5T5U3 1957 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 ANKUB1A6NFN9 424 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 ACOT8O14734 319 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 EFNA2O43921 213 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 TRIM25Q14258 630 aaKnown RBP12.36□□□□□ -0.43
NEK3-210ENST00000620675 QPRTQ15274 297 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 NRF1Q16656 503 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 GRAMD2AQ8IUY3 354 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 CMIPQ8IY22 773 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 ARHGAP24Q8N264 748 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 TAS2R10Q9NYW0 307 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 SPRR3Q9UBC9 169 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 DKKL1Q9UK85 242 aa12.36□□□□□ -0.43
NEK3-210ENST00000620675 ALPK2Q86TB3 2170 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 ACOT7O00154 380 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 NTN1O95631 604 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 OPN1LWP04000 364 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 HPNP05981 417 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 HK1P19367 917 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 SRD5A2P31213 254 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 DSCR4P56555 118 aaPredicted RBP12.35□□□□□ -0.43
NEK3-210ENST00000620675 EPS8Q12929 822 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 FOXF1Q12946 379 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 SLC10A1Q14973 349 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 CBLL1Q75N03 491 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 OR14L1PQ8NHC6 308 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 OR2B2Q9GZK3 357 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 GORASP2Q9H8Y8 452 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 DCAF13Q9NV06 445 aaKnown RBP12.35□□□□□ -0.43
NEK3-210ENST00000620675 B4GALT7Q9UBV7 327 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 USP9XQ93008 2570 aaPredicted RBP12.35□□□□□ -0.43
NEK3-210ENST00000620675 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 DOCK7Q96N67 2140 aa12.35□□□□□ -0.43
NEK3-210ENST00000620675 CFAP73A6NFT4 308 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 ANKRD65E5RJM6 399 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 CRYABP02511 175 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 PRKCAP17252 672 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 IDH2P48735 452 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 STARP49675 285 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 RASSF2P50749 326 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 SESN3P58005 492 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 SELENOWP63302 87 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 IGFBP7Q16270 282 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 C3AR1Q16581 482 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 ZSCAN26Q16670 478 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 POMZP3Q6PJE2 187 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PRICKLE2Q7Z3G6 844 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TSEN54Q7Z6J9 526 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 OIT3Q8WWZ8 545 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 MCUR1Q96AQ8 359 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 HSH2DQ96JZ2 352 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 ARHGDIGQ99819 225 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 EXOSC3Q9NQT5 275 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 ACTR3BQ9P1U1 418 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 MAGEL2Q9UJ55 1249 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 POMPQ9Y244 141 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 SPTBN1Q01082 2364 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 UBR5O95071 2799 aaPredicted RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 A0A1B0GTH9 108 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TCRBV5S2A0A599 114 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 OR2M5A3KFT3 312 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 H0YC42 278 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PYCARD-AS1I3L0S3 204 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PRKD3O94806 890 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PTNP21246 168 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PSMA4P25789 261 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 MSX1P28360 303 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TPD52P55327 224 aaPredicted RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 RGS8P57771 180 aaPredicted RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 TLE1Q04724 770 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 BNIP2Q12982 314 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 CBFBQ13951 182 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TMEM44Q2T9K0 475 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 RAET1LQ5VY80 246 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 CARM1Q86X55 608 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TOR1AIP2Q8NFQ8 470 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TNIP2Q8NFZ5 429 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 ASB9Q96DX5 294 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 DNAJA3Q96EY1 480 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 RNF145Q96MT1 663 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 GPR137Q96N19 417 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 TMEM185BQ9H7F4 350 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 PTGES2Q9H7Z7 377 aa12.34□□□□□ -0.43
NEK3-210ENST00000620675 CACYBPQ9HB71 228 aaKnown RBP12.34□□□□□ -0.43
NEK3-210ENST00000620675 PLSCR2Q9NRY7 297 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms