RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 ZNF614Q8N883 585 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 AGR3Q8TD06 166 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 NUDT8Q8WV74 236 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 IGFBPL1Q8WX77 278 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 KISS1RQ969F8 398 aaPredicted RBP10.62□□□□□ -0.71
UPF3B-204ENST00000619445 GTPBP3Q969Y2 492 aaKnown RBP10.62□□□□□ -0.71
UPF3B-204ENST00000619445 TRMT61AQ96FX7 289 aaKnown RBP10.62□□□□□ -0.71
UPF3B-204ENST00000619445 C1orf50Q9BV19 199 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 MECRQ9BV79 373 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 POTEKPQ9BYX7 375 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 C12orf49Q9H741 205 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 CXorf36Q9H7Y0 433 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 BCO1Q9HAY6 547 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 POLE3Q9NRF9 147 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 SLC17A7Q9P2U7 560 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 RNF115Q9Y4L5 304 aa10.62□□□□□ -0.71
UPF3B-204ENST00000619445 CADP27708 2225 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 RNASET2O00584 256 aaKnown RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ANKRD28O15084 1053 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 LY6G6DO95868 133 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 OPN1LWP04000 364 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 BPGMP07738 259 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 CD3EP07766 207 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 PGCP20142 388 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 EFNA1P20827 205 aaPredicted RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 SOAT1P35610 550 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 RPS4XP62701 263 aaKnown RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 CSNK2A1P68400 391 aaPredicted RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 HBA1P69905 142 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 TXNL4AP83876 142 aaKnown RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ITGADQ13349 1161 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF141Q15928 474 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 DPY19L1Q2PZI1 675 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ANXA8L1Q5VT79 327 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 CBLN3Q6UW01 205 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 Q6ZT83 130 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 EIF3MQ7L2H7 374 aaKnown RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 C16orf62Q7Z3J2 963 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 P2RY8Q86VZ1 359 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 NUDCD3Q8IVD9 361 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 TMCO5AQ8N6Q1 288 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 OR8J2Q8NGG1 315 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ABHD3Q8WU67 409 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ROBO4Q8WZ75 1007 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 FBXW5Q969U6 566 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ZHX1-C8orf76Q96EF9 292 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 OTUB1Q96FW1 271 aaPredicted RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 OR7D2Q96RA2 312 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 SDF2Q99470 211 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 NPAS1Q99742 590 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 SMR3AQ99954 134 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 LAT2Q9GZY6 243 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 EMC3Q9P0I2 261 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 ZDHHC2Q9UIJ5 367 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 SLC35A3Q9Y2D2 325 aa10.61□□□□□ -0.71
UPF3B-204ENST00000619445 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.61□□□□□ -0.71
UPF3B-204ENST00000619445 PLCE1Q9P212 2302 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 ZNF724A8MTY0 619 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 DNPH1O43598 174 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 DNAJA2O60884 412 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 SPAG7O75391 227 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 SKAP2O75563 359 aaPredicted RBP10.6□□□□□ -0.71
UPF3B-204ENST00000619445 GCM2O75603 506 aaPredicted RBP10.6□□□□□ -0.71
UPF3B-204ENST00000619445 MYZAPP0CAP1 466 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 MATN1P21941 496 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 ENPP1P22413 925 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 OR3A2P47893 321 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 CCR4P51679 360 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 ATP5J2P56134 94 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 QPRTQ15274 297 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 ARHGAP11BQ3KRB8 267 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.6□□□□□ -0.71
UPF3B-204ENST00000619445 DNAJC14Q6Y2X3 702 aaPredicted RBP10.6□□□□□ -0.71
UPF3B-204ENST00000619445 ZCCHC23Q6ZST2 131 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 C22orf34Q6ZV56 151 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 C6orf120Q7Z4R8 191 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 TUSC5Q8IXB3 177 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 KRTCAP2Q8N6L1 136 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 MIPOL1Q8TD10 442 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 AKAP1Q92667 903 aaKnown RBP eCLIP10.6□□□□□ -0.71
UPF3B-204ENST00000619445 MUCL1Q96DR8 90 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 RADILQ96JH8 1075 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 SLC35G5Q96KT7 338 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 C3orf30Q96M34 536 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 TMEM109Q9BVC6 243 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 SRXN1Q9BYN0 137 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 COQ10BQ9H8M1 238 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 FAIMQ9NVQ4 179 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 PRDM4Q9UKN5 801 aa10.6□□□□□ -0.71
UPF3B-204ENST00000619445 RNF103-CHMP3A0A140T963 221 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 PRSS51A0A1B0GVH4 220 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 GPR171O14626 319 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 BIRC5O15392 142 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 CYTIPO60759 359 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 CSTAP01040 98 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 SERPINE1P05121 402 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 G6PDP11413 515 aa10.59□□□□□ -0.71
UPF3B-204ENST00000619445 APOBEC1P41238 236 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms