RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 IFNA16P05015 189 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 IFNGR2P38484 337 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 TPTEP56180 551 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 FOXL2P58012 376 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 GPLD1P80108 840 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 NR0B2Q15466 257 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 NDUFAF6Q330K2 333 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 RRM2BQ7LG56 351 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 PLXDC1Q8IUK5 500 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF614Q8N883 585 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 FAM181AQ8N9Y4 354 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 ADAMTS18Q8TE60 1221 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 PMM1Q92871 262 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 DPH1Q9BZG8 443 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 MEPEQ9NQ76 525 aaPredicted RBP16.13■□□□□ 0.17
CNOT3-209ENST00000617930 CFL2Q9Y281 166 aa16.13■□□□□ 0.17
CNOT3-209ENST00000617930 IGKV3D-11A0A0A0MRZ8 115 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 PNMA8CA0A1B0GUJ8 204 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 PRAMEF2O60811 474 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 APOL3O95236 402 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 STAT5AP42229 794 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 SPANXN2Q5MJ10 180 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 BCORP1Q8N888 145 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 CEP76Q8TAP6 659 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 TEX47Q8TBZ9 253 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 TMEM163Q8TC26 289 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 SENP5Q96HI0 755 aaPredicted RBP16.12■□□□□ 0.17
CNOT3-209ENST00000617930 CEP19Q96LK0 163 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 A8MUA0 341 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 C17orf105B2RV13 164 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 SNPHO15079 494 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 FMO6PO60774 539 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 NGFRP08138 427 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 GUSBP08236 651 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 DEFA1P59665 94 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 DEFA3P59666 94 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 KRR1Q13601 381 aaKnown RBP16.12■□□□□ 0.17
CNOT3-209ENST00000617930 NCF4Q15080 339 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF141Q15928 474 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 SSX1Q16384 188 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 VWA2Q5GFL6 755 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 WDR74Q6RFH5 385 aaPredicted RBP16.12■□□□□ 0.17
CNOT3-209ENST00000617930 C19orf48Q6RUI8 117 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 PRR23CQ6ZRP0 262 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 AKAP14Q86UN6 197 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 ATCAYQ86WG3 371 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 OR52I1Q8NGK6 324 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 GRHL3Q8TE85 626 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 TMEM239Q8WW34 195 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 TMEM80Q96HE8 168 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 SAMD8Q96LT4 415 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 OPALINQ96PE5 141 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 YIPF2Q9BWQ6 316 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 NUAK2Q9H093 628 aa16.12■□□□□ 0.17
CNOT3-209ENST00000617930 CACYBPQ9HB71 228 aaKnown RBP16.12■□□□□ 0.17
CNOT3-209ENST00000617930 RPL36Q9Y3U8 105 aaKnown RBP16.12■□□□□ 0.17
CNOT3-209ENST00000617930 A0A0B4J2E0 115 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 A0A1B0GX12 115 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 SURF4O15260 269 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 HBQ1P09105 142 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 TBXA2RP21731 343 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 IFNA8P32881 189 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 SLC37A1P57057 533 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 ZNHIT3Q15649 155 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 MED25Q71SY5 747 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 LAPTM4BQ86VI4 370 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 GRAMD2AQ8IUY3 354 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 CYP4Z2PQ8N1L4 340 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 TOR1AIP2Q8NFQ8 470 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 ZNF501Q96CX3 271 aaPredicted RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 TMEM165Q9HC07 324 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 EXOSC4Q9NPD3 245 aaKnown RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 CBLCQ9ULV8 474 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 CARD8Q9Y2G2 431 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 PCDHGB6Q9Y5F9 930 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 SEC16AO15027 2179 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 A0A1B0GWA3 101 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 CSO75390 466 aaKnown RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 FGFBP1Q14512 234 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 C1orf189Q5VU69 101 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 MEDAGQ5VYS4 303 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 DESI1Q6ICB0 168 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 PRSS42Q7Z5A4 293 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 CLIP3Q96DZ5 547 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 TXNDC15Q96J42 360 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 KCNS3Q9BQ31 491 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 TAPBPLQ9BX59 468 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 HHATLQ9HCP6 504 aa16.11■□□□□ 0.17
CNOT3-209ENST00000617930 PNO1Q9NRX1 252 aaKnown RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 SIDT1Q9NXL6 827 aaKnown RBP16.11■□□□□ 0.17
CNOT3-209ENST00000617930 COL27A1Q8IZC6 1860 aaPredicted RBP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 LOC110117498-PIK3R3F6TDL0 507 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CER1O95813 267 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 SPNP16150 400 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 PNLIPP16233 465 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CSTF2P33240 577 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNOT3-209ENST00000617930 ETV5P41161 510 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 ETV1P50549 477 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 RHAGQ02094 409 aa16.1■□□□□ 0.17
CNOT3-209ENST00000617930 CARTPTQ16568 116 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms