RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 CLCA3PQ9Y6N3 262 aa16.51■□□□□ 0.23
SEMA6C-209ENST00000613223 U3KQA8 63 aa16.51■□□□□ 0.23
SEMA6C-209ENST00000613223 A0A1B0GWA3 101 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 TCRBV16S1A1N1A0A5B0 115 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 CPED1A4D0V7 1026 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 POLR1CO15160 346 aaPredicted RBP16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 PRODHO43272 600 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 IFI30P13284 250 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 SIGLEC14Q08ET2 396 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 KRR1Q13601 381 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 SLC30A6Q6NXT4 461 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 PARP16Q8N5Y8 322 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 LSMEM1Q8N8F7 131 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 OR2T33Q8NG76 320 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 PFN4Q8NHR9 129 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 BRIX1Q8TDN6 353 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 GRHL3Q8TE85 626 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 DPH1Q9BZG8 443 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 MED17Q9NVC6 651 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 SIDT1Q9NXL6 827 aaKnown RBP16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 MED31Q9Y3C7 131 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 LAMA1P25391 3075 aa16.5■□□□□ 0.23
SEMA6C-209ENST00000613223 LOC100506127A0A0U1RQW1 187 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 KDM4EB2RXH2 506 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SURF4O15260 269 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 YKT6O15498 198 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SIGLEC6O43699 453 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ADAM11O75078 769 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 IGKV3-11P04433 115 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ANKRD34CP0C6C1 535 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 RORAP35398 523 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ETV6P41212 452 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 PPICP45877 212 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 CSTF1Q05048 431 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 C19orf48Q6RUI8 117 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 TMPRSS9Q7Z410 1059 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 CDK20Q8IZL9 346 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ZNF321PQ8N8H1 164 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 FAM181AQ8N9Y4 354 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SLC2A12Q8TD20 617 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 OIT3Q8WWZ8 545 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 HTRA1Q92743 480 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 OR5M11Q96RB7 305 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 OR8D2Q9GZM6 311 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 FSCN3Q9NQT6 498 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 C20orf141Q9NUB4 165 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ATXN7L1Q9ULK2 861 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SRPK3Q9UPE1 567 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 IRGMA1A4Y4 181 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SERINC4A6NH21 518 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 EFCAB7A8K855 629 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 A8MUA0 341 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SNX4O95219 450 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MAKP20794 623 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 HOXD12P35452 270 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 RBM34P42696 430 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 TPTEP56180 551 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 CTBP2P56545 445 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MED22Q15528 200 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 BCL2A1Q16548 175 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 TMEM44Q2T9K0 475 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 TIMM50Q3ZCQ8 353 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 VWA2Q5GFL6 755 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 C1orf189Q5VU69 101 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ZNF574Q6ZN55 896 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 TMPRSS11FQ6ZWK6 438 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ANKK1Q8NFD2 765 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 FANK1Q8TC84 345 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 BPIFA2Q96DR5 249 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 CLIP3Q96DZ5 547 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ARSGQ96EG1 525 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SAMD8Q96LT4 415 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MGLLQ99685 303 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 CENPOQ9BU64 300 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 ZNF426Q9BUY5 554 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MND1Q9BWT6 205 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 RACGAP1Q9H0H5 632 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MKKSQ9NPJ1 570 aaPredicted RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 MRPS18AQ9NVS2 196 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 DIMT1Q9UNQ2 313 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 GPR52Q9Y2T5 361 aa16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 LSM2Q9Y333 95 aaKnown RBP16.49■□□□□ 0.23
SEMA6C-209ENST00000613223 SEC16AO15027 2179 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 PNMA8CA0A1B0GUJ8 204 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 DDAH2O95865 285 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 HMGN1P05114 100 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 HSMCR30P0CW71 290 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 SOX6P35712 828 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 EFNA3P52797 238 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 ACY1Q03154 408 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 KCNJ8Q15842 424 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 KLHL22Q53GT1 634 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 PEAR1Q5VY43 1037 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 RPL13AP3Q6NVV1 102 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 MAML2Q8IZL2 1156 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 SLC34A3Q8N130 599 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 FAM83FQ8NEG4 500 aaPredicted RBP16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 OR4C3Q8NH37 302 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 ZNF721Q8TF20 911 aa16.48■□□□□ 0.23
SEMA6C-209ENST00000613223 CHAC2Q8WUX2 184 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms