RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 GARNL3Q5VVW2 1013 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 FIGLAQ6QHK4 219 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 AHCYL2Q96HN2 611 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 C4orf36Q96KX1 117 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 UBL7Q96S82 380 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 GALNT9Q9HCQ5 603 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 CYSLTR2Q9NS75 346 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 SPTBN5Q9NRC6 3674 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 SMLR1H3BR10 107 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 ORC5O43913 435 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 PLOD3O60568 738 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 CPNE3O75131 537 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 RCBTB2O95199 551 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 MT-ND5P03915 603 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 CT62P0C5K7 136 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 PVRP15151 417 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 BMP8BP34820 402 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 ACVR1BP36896 505 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 KIR2DS3Q14952 304 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 THOC7Q6I9Y2 204 aaKnown RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 BMP8AQ7Z5Y6 402 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 LRRC28Q86X40 367 aaPredicted RBP18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 FAM131CQ96AQ9 280 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 NDC1Q9BTX1 674 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 TRPV5Q9NQA5 729 aa18.72■□□□□ 0.59
SHKBP1-225ENST00000600733 OR6C74A6NCV1 312 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC22A31A6NKX4 558 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 J3QLW9 94 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SLC43A1O75387 559 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ZNF19P17023 458 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 COL9A1P20849 921 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 F8A1P23610 371 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 GABRA3P34903 492 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 OR12D2P58182 307 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SHC2P98077 582 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 CRMP1Q14194 572 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 GPR176Q14439 515 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 EXOSC6Q5RKV6 272 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SFXN4Q6P4A7 337 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 TMPRSS11FQ6ZWK6 438 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ABHD13Q7L211 337 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 CEACAM19Q7Z692 300 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 CDRT4Q8N9R6 151 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 MYADMQ96S97 322 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 TTTY10Q9BZA0 68 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ADGRL4Q9HBW9 690 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 RPRD1BQ9NQG5 326 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 DUSP22Q9NRW4 184 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ACOXLQ9NUZ1 547 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 PILRAQ9UKJ1 303 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SATB2Q9UPW6 733 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 MED31Q9Y3C7 131 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 FANCMQ8IYD8 2048 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 MYO9BQ13459 2157 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 URADA6NGE7 173 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 INMT-MINDY4F8WBC2 141 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 RASGRP1O95267 797 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 PPP1R3DO95685 299 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ATP1B1P05026 303 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SBK2P0C263 348 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ERP29P30040 261 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 GPR18Q14330 331 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 AMZ1Q400G9 498 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ZC3H14Q6PJT7 736 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 CDK20Q8IZL9 346 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 SMAD5Q99717 465 aaKnown RBP18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 ACTR10Q9NZ32 417 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 MAT2BQ9NZL9 334 aa18.71■□□□□ 0.59
SHKBP1-225ENST00000600733 H0YGG7 62 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 TNFSF14O43557 240 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 PLPP2O43688 288 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 EVI2BP34910 448 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 TALDO1P37837 337 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 GZMKP49863 264 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 ARF3P61204 181 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 RRAS2P62070 204 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF85Q03923 595 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 TIGD3Q6B0B8 471 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 RFLNBQ8N5W9 214 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 ZNF614Q8N883 585 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 CAMKVQ8NCB2 501 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 OR13C5Q8NGS8 318 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 ABHD4Q8TB40 342 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 ZFAND1Q8TCF1 268 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 FAM3CQ92520 227 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 TRIM63Q969Q1 353 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 THAP7Q9BT49 309 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 KLHL1Q9NR64 748 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC35A3Q9Y2D2 325 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 RIIAD1A6NNX1 92 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 TRIM3O75382 744 aaPredicted RBP18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 NTSR1P30989 418 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 GALK2Q01415 458 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 NFATC4Q14934 902 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 PRICKLE4Q2TBC4 344 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 SLC25A35Q3KQZ1 300 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 SSX6Q7RTT6 188 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 PATE1Q8WXA2 126 aa18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 CNOT9Q92600 299 aaKnown RBP18.7■□□□□ 0.58
SHKBP1-225ENST00000600733 PEX11GQ96HA9 241 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms