RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 ULK3Q6PHR2 472 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 RASSF6Q6ZTQ3 369 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 OMA1Q96E52 524 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 Q96MT0 163 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 ADOQ96SZ5 270 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CNOT2Q9NZN8 540 aaKnown RBP18.41■□□□□ 0.54
PNKP-214ENST00000600573 RPS6KB2Q9UBS0 482 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 MYO15AQ9UKN7 3530 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 H3BMQ9 156 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 PLD2O14939 933 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 INMTO95050 263 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 THY1P04216 161 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CDK1P06493 297 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 ABCD3P28288 659 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 MAP2K4P45985 399 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 SMSP52788 366 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 NUDT6P53370 316 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 GP2P55259 537 aaKnown RBP18.41■□□□□ 0.54
PNKP-214ENST00000600573 EXT1Q16394 746 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CCDC157Q569K6 752 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CCDC81Q6ZN84 652 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 PRICKLE2Q7Z3G6 844 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CACTIN-AS1Q8N1I8 211 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 CLDN22Q8N7P3 220 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 GALNT6Q8NCL4 622 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 OR8J1Q8NGP2 316 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 RAB2BQ8WUD1 216 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 TMEM239Q8WW34 195 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 GGHQ92820 318 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 NACC2Q96BF6 587 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 FAM46AQ96IP4 442 aaKnown RBP18.41■□□□□ 0.54
PNKP-214ENST00000600573 COG8Q96MW5 612 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 GPA33Q99795 319 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 PRSS27Q9BQR3 290 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 PRRG3Q9BZD7 231 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 HHATLQ9HCP6 504 aa18.41■□□□□ 0.54
PNKP-214ENST00000600573 WARS2Q9UGM6 360 aaKnown RBP18.41■□□□□ 0.54
PNKP-214ENST00000600573 ASCC3Q8N3C0 2202 aaKnown RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 IGHV3-20A0A0C4DH32 117 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 ALG1L2C9J202 215 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 GTPBP1O00178 669 aaKnown RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 ZNF264O43296 627 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 GDF9O60383 454 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 EIF4E2O60573 245 aaKnown RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 UBL4AP11441 157 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 FOLR3P41439 243 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 LSM11P83369 360 aaKnown RBP eCLIP18.4■□□□□ 0.541e-11■■■■■ 50.1
PNKP-214ENST00000600573 PLAURQ03405 335 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 TBCEQ15813 527 aaPredicted RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 KIF18BQ86Y91 864 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 MISPQ8IVT2 679 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 SLC15A4Q8N697 577 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 PRSS33Q8NF86 280 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 TMEM255BQ8WV15 326 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 ZFAND2BQ8WV99 257 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 TEX12Q9BXU0 123 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 POLDIP3Q9BY77 421 aaKnown RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 LAT2Q9GZY6 243 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 ZNF700Q9H0M5 742 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 AKIRIN1Q9H9L7 192 aaPredicted RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 ACOT13Q9NPJ3 140 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 PTRH2Q9Y3E5 179 aaKnown RBP18.4■□□□□ 0.54
PNKP-214ENST00000600573 NPFFR2Q9Y5X5 522 aa18.4■□□□□ 0.54
PNKP-214ENST00000600573 RALGAPA1Q6GYQ0 2036 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 A0A1W2PQ72 361 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 KLF7O75840 302 aaPredicted RBP18.39■□□□□ 0.53
PNKP-214ENST00000600573 LYPD3O95274 346 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 NBL1P41271 181 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 RNF144AP50876 292 aaPredicted RBP18.39■□□□□ 0.53
PNKP-214ENST00000600573 CDK5Q00535 292 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 PRKCDQ05655 676 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 GINS1Q14691 196 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 FAM199XQ6PEV8 388 aaPredicted RBP18.39■□□□□ 0.53
PNKP-214ENST00000600573 NRMQ8IXM6 262 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 STX19Q8N4C7 294 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 IQCF1Q8N6M8 205 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 LMF1Q96S06 567 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 PARD6AQ9NPB6 346 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 TOR4AQ9NXH8 423 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 CNIH4Q9P003 139 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 PISDQ9UG56 409 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 ZNF223Q9UK11 482 aaPredicted RBP18.39■□□□□ 0.53
PNKP-214ENST00000600573 MED31Q9Y3C7 131 aa18.39■□□□□ 0.53
PNKP-214ENST00000600573 A0A1B0GWA3 101 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 KLF4O43474 513 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 PIP5K1CO60331 668 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 PPM1BO75688 479 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 DLGAP3O95886 979 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 PIPP12273 146 aaPredicted RBP18.38■□□□□ 0.53
PNKP-214ENST00000600573 PCSK6P29122 969 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 ETV5P41161 510 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 PCYT1AP49585 367 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 TMED10P49755 219 aaKnown RBP18.38■□□□□ 0.53
PNKP-214ENST00000600573 CTBP2P56545 445 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 SYT6Q5T7P8 510 aaPredicted RBP18.38■□□□□ 0.53
PNKP-214ENST00000600573 UBE2UQ5VVX9 321 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 SLC27A4Q6P1M0 643 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 C9orf43Q8TAL5 461 aaPredicted RBP18.38■□□□□ 0.53
PNKP-214ENST00000600573 M1APQ8TC57 530 aa18.38■□□□□ 0.53
PNKP-214ENST00000600573 PHOSPHO1Q8TCT1 267 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms