RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 E9PQ18 207 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SYT5O00445 386 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PLOD3O60568 738 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LIMS3P0CW19 117 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LIMS4P0CW20 117 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 EIPR1Q53HC9 387 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF628Q5EBL2 1059 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ALG10BQ5I7T1 473 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ATAD3CQ5T2N8 411 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 OTPQ5XKR4 325 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF544Q6NX49 715 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LINC00471Q8N535 108 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 TMEM99Q8N816 258 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SDR9C7Q8NEX9 313 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ATP6V1C2Q8NEY4 427 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 TNFRSF13CQ96RJ3 184 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 FUZQ9BT04 418 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR8D2Q9GZM6 311 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LMAN1LQ9HAT1 526 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 CPNE5Q9HCH3 593 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 RANGRFQ9HD47 186 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 KRCC1Q9NPI7 259 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LSM2Q9Y333 95 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR5K3A6NET4 321 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRR19A6NJB7 356 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 DBIP07108 87 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PSKH1P11801 424 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PIPP12273 146 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF45Q02386 682 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 BAK1Q16611 211 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARHGAP11BQ3KRB8 267 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 KLHL36Q8N4N3 616 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 C19orf18Q8NEA5 215 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR6K6Q8NGW6 343 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR4C6Q8NH72 309 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 NEIL3Q8TAT5 605 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZMYND19Q96E35 227 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 HOXD1Q9GZZ0 328 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 POT1Q9NUX5 634 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 CCDC59Q9P031 241 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 CDH10Q9Y6N8 788 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 MUC22E2RYF6 1773 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 RP1P56715 2156 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SMLR1H3BR10 107 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SURF4O15260 269 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SLITRK5O94991 958 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 NID1P14543 1247 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SDHBP21912 280 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 MLLT3P42568 568 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 TSFMP43897 325 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF136P52737 540 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 RAB40BQ12829 278 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 KRR1Q13601 381 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 IL18Q14116 193 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM53BQ14153 422 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 IDNKQ5T6J7 187 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRPF38BQ5VTL8 546 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 TTLL10Q6ZVT0 673 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 ABI3BPQ7Z7G0 1075 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 GJD3Q8N144 294 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LRRC17Q8N6Y2 441 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 NT5CQ8TCD5 201 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SCARF2Q96GP6 870 aaPredicted RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 DGAT2Q96PD7 388 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LRRC61Q9BV99 259 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 TAPBPLQ9BX59 468 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 FOXQ1Q9C009 403 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 NRSN2Q9GZP1 204 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 CCDC86Q9H6F5 360 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SP140LQ9H930 580 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRTFDC1Q9NRG1 225 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 NDUFB11Q9NX14 153 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 LRIT1Q9P2V4 623 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 MRPS7Q9Y2R9 242 aaKnown RBP10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 GRIP1Q9Y3R0 1128 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 CMAHPQ9Y471 501 aa10.68□□□□□ -0.7
ARHGEF1-220ENST00000600274 SPTY2D1-AS1A0A0U1RR47 76 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 A0A1W2PQ09 198 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 HYKKA2RU49 373 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 FAM86C2PA6NEL3 165 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRR23D1E9PI22 279 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 ZNF670-ZNF695F2Z2N8 137 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 OR5F1O95221 314 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 NUDT14O95848 222 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 AGR2O95994 175 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 PRR23D2P0DMB1 279 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 FPR3P25089 353 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 STAT5AP42229 794 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 CRMP1Q14194 572 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 KIAA0895LQ68EN5 471 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 C19orf47Q8N9M1 422 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 SUN5Q8TC36 379 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 AHCYL2Q96HN2 611 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 HS6ST2Q96MM7 605 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 ERMAPQ96PL5 475 aaPredicted RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 PSD2Q9BQI7 771 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 DHCR7Q9UBM7 475 aaKnown RBP10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 ARID1AO14497 2285 aa10.67□□□□□ -0.7
ARHGEF1-220ENST00000600274 A0A1B0GVT2 93 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms