RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ELAVL4P26378 380 aaKnown RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 PTGDSP41222 190 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 LIMS1P48059 325 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 MASP1P48740 699 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 ST13P50502 369 aaKnown RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 PPP1R8Q12972 351 aaKnown RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 RAPSNQ13702 412 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 TUBA3CQ13748 450 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 DAG1Q14118 895 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 MICAQ29983 383 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 COL28A1Q2UY09 1125 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 OTUD3Q5T2D3 398 aaPredicted RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 ZNF468Q5VIY5 522 aaPredicted RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 BICRALQ6AI39 1079 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 PPP4R4Q6NUP7 873 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 TUBA3EQ6PEY2 450 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 ULK3Q6PHR2 472 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 RRM2BQ7LG56 351 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 GDF7Q7Z4P5 450 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 PACS2Q86VP3 889 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 EPHX4Q8IUS5 362 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 PSD4Q8NDX1 1056 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 OR10G2Q8NGC3 310 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 OR4K17Q8NGC6 315 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 TMEM234Q8WY98 164 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 ARSGQ96EG1 525 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 MPP4Q96JB8 637 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 DCBLD2Q96PD2 775 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 RBM4BQ9BQ04 359 aaKnown RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 RBM4Q9BWF3 364 aaKnown RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 RTN4RQ9BZR6 473 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 GABARAPL1Q9H0R8 117 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 COQ10BQ9H8M1 238 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 KRCC1Q9NPI7 259 aaPredicted RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 ANKRD10Q9NXR5 420 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 PDP1Q9P0J1 537 aaPredicted RBP14.1□□□□□ -0.15
UPF1-206ENST00000598471 SLC7A7Q9UM01 511 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 ICAM5Q9UMF0 924 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 NTNG1Q9Y2I2 539 aa14.1□□□□□ -0.15
UPF1-206ENST00000598471 A0A0B4J2E0 115 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 TRBV4-1A0A0J9YWV2 114 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 A0A1B0GX12 115 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 OR5H15A6NDH6 313 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ARRDC5A6NEK1 342 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 PDLIM1O00151 329 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ADAM10O14672 748 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 EI24O14681 340 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 WDPCPO95876 746 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 GP1BBP13224 206 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 IFNGR2P38484 337 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 CD96P40200 585 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 IDH2P48735 452 aaKnown RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 FOXD4Q12950 439 aaPredicted RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 OR1C1Q15619 314 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ALG10BQ5I7T1 473 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 TMEM179BQ7Z7N9 219 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 TSPYL5Q86VY4 417 aaPredicted RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ACOT11Q8WXI4 607 aaPredicted RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 TMEM41AQ96HV5 264 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ZNF597Q96LX8 424 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 HS6ST2Q96MM7 605 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 FRMD6Q96NE9 622 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 TACO1Q9BSH4 297 aaKnown RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 ZNF552Q9H707 407 aaPredicted RBP14.09□□□□□ -0.15
UPF1-206ENST00000598471 PTGES2Q9H7Z7 377 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 TAS2R10Q9NYW0 307 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 ORC6Q9Y5N6 252 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 KCNMB2Q9Y691 235 aa14.09□□□□□ -0.15
UPF1-206ENST00000598471 C2orf72A6NCS6 295 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 H0YJX3 145 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 SOCS2O14508 198 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 SNPHO15079 494 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 GMFGO60234 142 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 OR10H3O60404 316 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ADAM11O75078 769 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 SLC25A12O75746 678 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 PNMTP11086 282 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ANXA8P13928 327 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 SLC1A3P43003 542 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ALDH3A2P51648 485 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ZNF41P51814 821 aaPredicted RBP14.08□□□□□ -0.16
UPF1-206ENST00000598471 ARG2P78540 354 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ST3GAL2Q16842 350 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 IZUMO2Q6UXV1 221 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ZNF730Q6ZMV8 503 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 MDGA2Q7Z553 956 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 PLCZ1Q86YW0 608 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 GALNT4Q8N4A0 578 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 SLC7A13Q8TCU3 470 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 GPR119Q8TDV5 335 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 DNAJC9Q8WXX5 260 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ST8SIA1Q92185 356 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 C5orf34Q96MH7 638 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 PSD2Q9BQI7 771 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 ZNF556Q9HAH1 456 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 C12orf10Q9HB07 376 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 MAN2C1Q9NTJ4 1040 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 USE1Q9NZ43 259 aa14.08□□□□□ -0.16
UPF1-206ENST00000598471 MED11Q9P086 117 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms