RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 HSDL2Q6YN16 418 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF367Q7RTV3 350 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 LSMEM1Q8N8F7 131 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 BPIFA2Q96DR5 249 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC38A2Q96QD8 506 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 SYNDIG1Q9H7V2 258 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 EVA1AQ9H8M9 152 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 HHATLQ9HCP6 504 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 TMEM9BQ9NQ34 198 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 CHCHD3Q9NX63 227 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 CSTAP01040 98 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF883P0CG24 379 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 TBXA2RP21731 343 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 GADD45AP24522 165 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ENTPD1P49961 510 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 KLHL26Q53HC5 615 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 NUP210LQ5VU65 1888 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 PAQR6Q6TCH4 344 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 KIRREL2Q6UWL6 708 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 CADM2Q8N3J6 435 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 CLDN22Q8N7P3 220 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 OR4D9Q8NGE8 314 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ADIPOR1Q96A54 375 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 OR6C1Q96RD1 312 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF426Q9BUY5 554 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 TRIM2Q9C040 744 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 OR52D1Q9H346 318 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 UBQLN3Q9H347 655 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 LRRN3Q9H3W5 708 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 LSM2Q9Y333 95 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 MED31Q9Y3C7 131 aa15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 ASCC3Q8N3C0 2202 aaKnown RBP15.67■□□□□ 0.1
SHKBP1-216ENST00000598201 POLR1CO15160 346 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 GDF9O60383 454 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 APOL3O95236 402 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 ANKRD34CP0C6C1 535 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 CSTF2P33240 577 aaKnown RBP eCLIP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 RGS6P49758 472 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 ALG10BQ5I7T1 473 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 DESI1Q6ICB0 168 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 RHBDD2Q6NTF9 364 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 LANCL3Q6ZV70 420 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 TMPRSS11FQ6ZWK6 438 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 CMIPQ8IY22 773 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC34A3Q8N130 599 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 GATSQ8NAP1 163 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 ANKK1Q8NFD2 765 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 OR52I1Q8NGK6 324 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 OR13C2Q8NGS9 318 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 FANK1Q8TC84 345 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 BRIX1Q8TDN6 353 aaKnown RBP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 LGALS12Q96DT0 336 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 GAL3ST4Q96RP7 486 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 MGLLQ99685 303 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 NRSN2Q9GZP1 204 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 MKKSQ9NPJ1 570 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 SYNDIG1LA6NDD5 238 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 KDM4EB2RXH2 506 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 PRODHO43272 600 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 DYRK3O43781 588 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 IL33O95760 270 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 CD226Q15762 336 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 APOOLQ6UXV4 268 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 ZNF550Q7Z398 422 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 C9orf40Q8IXQ3 194 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 PRR22Q8IZ63 422 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 OR2T33Q8NG76 320 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 LCORQ96JN0 433 aaPredicted RBP15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 CCDC74BQ96LY2 380 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 HS6ST2Q96MM7 605 aa15.66■□□□□ 0.1
SHKBP1-216ENST00000598201 CDC14CA4D256 554 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 FRG2CA6NGY1 282 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 EFCAB9A8MZ26 197 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 GNB5O14775 395 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 OIP5O43482 229 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 AIREO43918 545 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 CLPXO76031 633 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 CTBP2P56545 445 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 ACY1Q03154 408 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 FNDC7Q5VTL7 733 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 FAAH2Q6GMR7 532 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 LINC00114Q6XXX2 140 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 THSD4Q6ZMP0 1018 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 SLC35B4Q969S0 331 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 MESP1Q9BRJ9 268 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 SRPK3Q9UPE1 567 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 SIGLEC7Q9Y286 467 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 HEATR5AQ86XA9 2040 aa15.65■□□□□ 0.1
SHKBP1-216ENST00000598201 C4orf47A7E2U8 309 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 CSO75390 466 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 INHBBP09529 407 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 EBPQ15125 230 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 TSTQ16762 297 aaKnown RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 ZSWIM7Q19AV6 140 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 SOWAHCQ53LP3 525 aaPredicted RBP15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 AADACL4Q5VUY2 407 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 PWWP2BQ6NUJ5 590 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 BBS1Q8NFJ9 593 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 STT3BQ8TCJ2 826 aa15.64■□□□□ 0.09
SHKBP1-216ENST00000598201 DYNC2LI1Q8TCX1 351 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms