RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 SMSP52788 366 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PHEXP78562 749 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PLGLB1Q02325 96 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 FUT7Q11130 342 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 GXYLT1Q4G148 440 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 SGO1Q5FBB7 561 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PLAC9Q5JTB6 97 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ZNF678Q5SXM1 525 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 NDUFAF5Q5TEU4 345 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TTC19Q6DKK2 380 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 OR52E8Q6IFG1 317 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ARHGAP11AQ6P4F7 1023 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TMEM64Q6YI46 380 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 FAM47EQ6ZV65 393 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TRILQ7L0X0 811 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TAOK1Q7L7X3 1001 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 COMMD6Q7Z4G1 85 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 MTERF4Q7Z6M4 381 aaKnown RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 SRRM1Q8IYB3 904 aaKnown RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 OR8H2Q8N162 312 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ZNF615Q8N8J6 731 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ACBD4Q8NC06 268 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ADPRHL1Q8NDY3 354 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TRPC4APQ8TEL6 797 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PAQR8Q8TEZ7 354 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 SLC25A43Q8WUT9 341 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 RIT1Q92963 219 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 RFKQ969G6 155 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TM4SF18Q96CE8 201 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 SPACA9Q96E40 222 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 ART5Q96L15 291 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 TMEM237Q96Q45 408 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 HBEGFQ99075 208 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 RHOXF2Q9BQY4 288 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PELOQ9BRX2 385 aaKnown RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 CXorf21Q9HAI6 301 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 SAP30LQ9HAJ7 183 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 IL1RL2Q9HB29 575 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 CHST11Q9NPF2 352 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 PNPLA3Q9NST1 481 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 ARGLU1Q9NWB6 273 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 CHCHD2Q9Y6H1 151 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 IKBKGQ9Y6K9 419 aa6.84□□□□□ -1.31
VMP1-213ENST00000591877 V9GYY5 206 aaPredicted RBP6.84□□□□□ -1.31
VMP1-213ENST00000591877 KIAA1549Q9HCM3 1950 aa6.84□□□□□ -1.32
VMP1-213ENST00000591877 IQANK1A0A1B0GTG1 560 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 LRRC3CA6NJW4 275 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 NPIPA2E9PIF3 369 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 NPIPA3F8WFD2 350 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 GOLGA8RI6L899 631 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 OR10H2O60403 315 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 DOK2O60496 412 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 PTP4A3O75365 173 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 LRATO95237 230 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 OTCP00480 354 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 P04436 131 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 H2AFXP16104 143 aaPredicted RBP6.83□□□□□ -1.32
VMP1-213ENST00000591877 PIK3R1P27986 724 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 TNFRSF8P28908 595 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 HTR6P50406 440 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 XKP51811 444 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 RAE1P78406 368 aaKnown RBP6.83□□□□□ -1.32
VMP1-213ENST00000591877 IFT88Q13099 833 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 NTRK2Q16620 822 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 RUNDC3AQ59EK9 446 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 CCNYL2Q5T2Q4 361 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 FAM69AQ5T7M9 428 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 PRAMEF20Q5VT98 475 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SLC22A10Q63ZE4 541 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 RTL6Q6ICC9 239 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SLC48A1Q6P1K1 146 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 RGS9BPQ6ZS82 235 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SH2D5Q6ZV89 423 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 Q6ZWC4 215 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 TRMT10CQ7L0Y3 403 aaKnown RBP6.83□□□□□ -1.32
VMP1-213ENST00000591877 SLC22A16Q86VW1 577 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 IFT20Q8IY31 132 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 LRRC25Q8N386 305 aaPredicted RBP6.83□□□□□ -1.32
VMP1-213ENST00000591877 BEND2Q8NDZ0 799 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 TNIP2Q8NFZ5 429 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 OR10G3Q8NGC4 313 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 OR4K14Q8NGD5 310 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SLC22A8Q8TCC7 542 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SELENOMQ8WWX9 145 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 ADIPOR1Q96A54 375 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 NTNG2Q96CW9 530 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SNX18Q96RF0 628 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 GAL3ST4Q96RP7 486 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 ELOVL6Q9H5J4 265 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 WDR41Q9HAD4 459 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 BRF2Q9HAW0 419 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 ALKBH4Q9NXW9 302 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 ZNF639Q9UID6 485 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 EMCNQ9ULC0 261 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 RNF6Q9Y252 685 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 DTX4Q9Y2E6 619 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 TESMINQ9Y4I5 508 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 FAM215AQ9Y5M1 114 aa6.83□□□□□ -1.32
VMP1-213ENST00000591877 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.83□□□□□ -1.32
VMP1-213ENST00000591877 INTS1Q8N201 2190 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms