RNA–Protein interactions for RNA: ENST00000591107.6

NPC1-212, Transcript of NPC intracellular cholesterol transporter 1, human

TSL 3

Gene NPC1, Length 890 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPC1-212	ENST00000591107	LSR	Q86X29	649 aa	Predicted RBP	11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	GLB1L3	Q8NCI6	653 aa	Predicted RBP	11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	OR7A2P	Q8NGA2	310 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	SPDL1	Q96EA4	605 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	MDFI	Q99750	246 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	GLIPR2	Q9H4G4	154 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	REEP4	Q9H6H4	257 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	TMEM185B	Q9H7F4	350 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	DDX18	Q9NVP1	670 aa	Known RBP	11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	PROCR	Q9UNN8	238 aa		11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	GPC6	Q9Y625	555 aa	Predicted RBP	11.88	□□□□□ -0.51
NPC1-212	ENST00000591107	MYO1G	B0I1T2	1018 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	UPK1A	O00322	258 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	EIF1AY	O14602	144 aa	Known RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	ANGPT2	O15123	496 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	COQ9	O75208	318 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	BCAS2	O75934	225 aa	Predicted RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	DDC	P20711	480 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	EFNA1	P20827	205 aa	Predicted RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	S100A3	P33764	101 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	RPL3	P39023	403 aa	Known RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	EIF1AX	P47813	144 aa	Known RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	HSPB3	Q12988	150 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	PGS1	Q32NB8	556 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	GRAMD1B	Q3KR37	738 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	MMEL1	Q495T6	779 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	VPS26B	Q4G0F5	336 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	REP15	Q6BDI9	236 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	ZNF551	Q7Z340	670 aa	Predicted RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	GGN	Q86UU5	652 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	DUSP19	Q8WTR2	217 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	VPS33A	Q96AX1	596 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	TESC	Q96BS2	214 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	RCN3	Q96D15	328 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	C1GALT1C1	Q96EU7	318 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	RNF122	Q9H9V4	155 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	SLC52A3	Q9NQ40	469 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	ZNF226	Q9NYT6	803 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	TAS2R9	Q9NYW1	312 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	ATP6V1H	Q9UI12	483 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	WBP11	Q9Y2W2	641 aa	Known RBP	11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	DSCAM	O60469	2012 aa		11.87	□□□□□ -0.51
NPC1-212	ENST00000591107	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107		A0A1W2PP18	115 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	BBIP1	A8MTZ0	92 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	FBP2	O00757	339 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	MRAS	O14807	208 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	AIM2	O14862	343 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	CFLAR	O15519	480 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	ARHGEF9	O43307	516 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	EMC8	O43402	210 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	UTS2	O95399	124 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PSMG1	O95456	288 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	NTN1	O95631	604 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	IL6	P05231	212 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PGR	P06401	933 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	NTS	P30990	170 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PTH2R	P49190	550 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	MXRA7	P84157	204 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PDE7A	Q13946	482 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	HEPACAM	Q14CZ8	416 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	GUSBP1	Q15486	140 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	DPY19L1	Q2PZI1	675 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	ZNF385B	Q569K4	471 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	CPTP	Q5TA50	214 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	OR4F3	Q6IEY1	312 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	OR2A2	Q6IF42	318 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	RINL	Q6ZS11	566 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	SZRD1	Q7Z422	152 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	R3HCC1L	Q7Z5L2	792 aa	Known RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	ZAR1	Q86SH2	424 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	WFDC8	Q8IUA0	241 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	MAPK1IP1L	Q8NDC0	245 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	TSPEAR	Q8WU66	669 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	CIDEC	Q96AQ7	238 aa	Predicted RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PPCDC	Q96CD2	204 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	MTERF3	Q96E29	417 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PRPF18	Q99633	342 aa	Known RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	MIEF1	Q9NQG6	463 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	SH3BP4	Q9P0V3	963 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	LEF1	Q9UJU2	399 aa	Predicted RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	C19orf53	Q9UNZ5	99 aa	Predicted RBP	11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	NDUFAF1	Q9Y375	327 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	PRR14L	Q5THK1	2151 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107	ROS1	P08922	2347 aa		11.86	□□□□□ -0.51
NPC1-212	ENST00000591107		B2RBV5	119 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	C16orf97	H3BN30	126 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	ATP5H	O75947	161 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	IL33	O95760	270 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	ANGPTL1	O95841	491 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	CRH	P06850	196 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	LAMP1	P11279	417 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	MPI	P34949	423 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	NUDT2	P50583	147 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	NCALD	P61601	193 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	PHC1	P78364	1004 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	TSC22D1	Q15714	1073 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	BCL2A1	Q16548	175 aa		11.85	□□□□□ -0.51
NPC1-212	ENST00000591107	SGCB	Q16585	318 aa		11.85	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms