RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 ANKZF1Q9H8Y5 726 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 GPATCH2Q9NW75 528 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 ATP6V1HQ9UI12 483 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 TMED5Q9Y3A6 229 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 KCNE3Q9Y6H6 103 aa16.3■□□□□ 0.2
CCDC43-204ENST00000588687 ALPK2Q86TB3 2170 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 GJE1A6NN92 205 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 AZIN1O14977 448 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 SCAMP2O15127 329 aaKnown RBP16.29■□□□□ 0.2
CCDC43-204ENST00000588687 LYZL6O75951 148 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 H6PDO95479 791 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 CRHR1P34998 444 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 RAC3P60763 192 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 SELENBP1Q13228 472 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 PCLAFQ15004 111 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 DCST2Q5T1A1 773 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 LIPMQ5VYY2 423 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 C11orf71Q6IPW1 123 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 SLC43A2Q8N370 569 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 MNS1Q8NEH6 495 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 ZNF300Q96RE9 604 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-204ENST00000588687 KLHL9Q9P2J3 617 aa16.29■□□□□ 0.2
CCDC43-204ENST00000588687 NUP214P35658 2090 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-204ENST00000588687 IGHV4-30-2A0A087WSY4 118 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 A0A1W2PNR3 127 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 RNF212BA8MTL3 300 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 TMEM233B4DJY2 109 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 CYTIPO60759 359 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 DNAJA2O60884 412 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 TP53P04637 393 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-204ENST00000588687 LINC00032P0C843 101 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 CPA3P15088 417 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 IGHV1-2P23083 117 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 C21orf58P58505 322 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 UGT3A2Q3SY77 523 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 PODNL1Q6PEZ8 512 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 LRIG3Q6UXM1 1119 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 CNPY4Q8N129 248 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 OR7A2PQ8NGA2 310 aa16.28■□□□□ 0.2
CCDC43-204ENST00000588687 GATA5Q9BWX5 397 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-204ENST00000588687 GPRIN2O60269 458 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 PGM3O95394 542 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 SHBGP04278 402 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 LAMP1P11279 417 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ASMTP46597 345 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ATP12AP54707 1039 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 CDH11P55287 796 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 PPA1Q15181 289 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 XKR7Q5GH72 579 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 C6orf52Q5T4I8 152 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ABLIM2Q6H8Q1 611 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.27■□□□□ 0.2
CCDC43-204ENST00000588687 C10orf107Q8IVU9 208 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ZNF527Q8NB42 609 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 OR10H5Q8NGA6 315 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 ACTRT3Q9BYD9 372 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 BARX1Q9HBU1 254 aaPredicted RBP16.27■□□□□ 0.2
CCDC43-204ENST00000588687 YAE1D1Q9NRH1 226 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 CISD1Q9NZ45 108 aaKnown RBP16.27■□□□□ 0.2
CCDC43-204ENST00000588687 GIMAP2Q9UG22 337 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 B3GALT5Q9Y2C3 310 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 FIS1Q9Y3D6 152 aa16.27■□□□□ 0.2
CCDC43-204ENST00000588687 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 ZNF724A8MTY0 619 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 NUDT14O95848 222 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 CHRNGP07510 517 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 ATP6V1C1P21283 382 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 IRX1P78414 480 aaPredicted RBP16.26■□□□□ 0.19
CCDC43-204ENST00000588687 SKP2Q13309 424 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 QPRTQ15274 297 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 STK11Q15831 433 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 GALNTL6Q49A17 601 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 TIMM23BQ5SRD1 257 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 R3HCC1LQ7Z5L2 792 aaKnown RBP16.26■□□□□ 0.19
CCDC43-204ENST00000588687 ATP6V1C2Q8NEY4 427 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 OR5W2Q8NH69 310 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 HS6ST2Q96MM7 605 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 TRMOQ9BU70 441 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 HOXD1Q9GZZ0 328 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 SERHL2Q9H4I8 314 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 L2HGDHQ9H9P8 463 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 KCNE5Q9UJ90 142 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 DTNAQ9Y4J8 743 aa16.26■□□□□ 0.19
CCDC43-204ENST00000588687 OR5H1A6NKK0 313 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 A8MV72 311 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-204ENST00000588687 ABCD4O14678 606 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 PIP5K1BO14986 540 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 PTNP21246 168 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 SLC7A1P30825 629 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 HPCAL1P37235 193 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 SPOCK1Q08629 439 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 RASGEF1BQ0VAM2 473 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 TP53BP2Q13625 1128 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 PTGR1Q14914 329 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 NRF1Q16656 503 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 C3orf33Q6P1S2 294 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 GSPT2Q8IYD1 628 aaKnown RBP16.25■□□□□ 0.19
CCDC43-204ENST00000588687 ZNF433Q8N7K0 673 aaPredicted RBP16.25■□□□□ 0.19
CCDC43-204ENST00000588687 OR56A1Q8NGH5 318 aa16.25■□□□□ 0.19
CCDC43-204ENST00000588687 TWIST2Q8WVJ9 160 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms