RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 ANKRD61A6NGH8 418 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 GTPBP1O00178 669 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 BTN3A3O00478 584 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 SLC31A1O15431 190 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 LATO43561 262 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 IFI30P13284 250 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 UGT2B7P16662 529 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 HNRNPA2B1P22626 353 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 SLC6A6P31641 620 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 AKT2P31751 481 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ACSL1P33121 698 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ACTR1BP42025 376 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF136P52737 540 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ACTR1AP61163 376 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 BTG1P62324 171 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 PITPNAQ00169 270 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF155Q12901 538 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ILF3Q12906 894 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 18.7
NEDD4L-223ENST00000588516 CDK10Q15131 360 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 LTB4RQ15722 352 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 GPR68Q15743 365 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 DUSP5Q16690 384 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 FHL5Q5TD97 284 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ARHGAP11AQ6P4F7 1023 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 FAM111BQ6SJ93 734 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 SPATC1Q76KD6 591 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF550Q7Z398 422 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 CACUL1Q86Y37 369 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 KLBQ86Z14 1044 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 GALNT12Q8IXK2 581 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 TCTE3Q8IZS6 198 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 HAVCR2Q8TDQ0 301 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 PHYHIPQ92561 330 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 CCNL2Q96S94 520 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 TMEM43Q9BTV4 400 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 TP63Q9H3D4 680 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 NIPAL2Q9H841 368 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 HINT3Q9NQE9 182 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 POT1Q9NUX5 634 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 MRPL39Q9NYK5 338 aaKnown RBP13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 CHST2Q9Y4C5 530 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 NOX1Q9Y5S8 564 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 NPFFR2Q9Y5X5 522 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 HS3ST3A1Q9Y663 406 aa13.02□□□□□ -0.33
NEDD4L-223ENST00000588516 KIR2DS5A0A0G2JLQ3 304 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 A0A0G2JNG1 304 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 C12orf71A8MTZ7 269 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 K7EQS6 105 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 KIR2DS3K7RE56 304 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 LYRM1O43325 122 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 FRS3O43559 492 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 PPM1BO75688 479 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CH25HO95992 272 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 STATHP02808 62 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CD1AP06126 327 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 HOXB2P14652 356 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 NT5EP21589 574 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 RFX3P48380 749 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ACTA2P62736 377 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ACTG2P63267 376 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 BIKQ13323 160 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 RUNX2Q13950 521 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 DOC2BQ14184 412 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 KIR2DS5Q14953 304 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CSRP2Q16527 193 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 DEFB134Q4QY38 66 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 FLYWCH1Q4VC44 716 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 HSD17B12Q53GQ0 312 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ZMAT1Q5H9K5 638 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 PARM1Q6UWI2 310 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 OLIG3Q7RTU3 272 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 NOXA1Q86UR1 476 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 FAM20CQ8IXL6 584 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CMIPQ8IY22 773 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 SYT14Q8NB59 555 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 AVL9Q8NBF6 648 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 C7orf57Q8NEG2 295 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 OR51G2Q8NGK0 314 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 OR5W2Q8NH69 310 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 OR1E3Q8WZA6 343 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 FGF14Q92915 247 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ZG16BQ96DA0 208 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 BPIFA2Q96DR5 249 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ST6GAL2Q96JF0 529 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 CMTM3Q96MX0 182 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 ZNF578Q96N58 590 aaPredicted RBP13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 NEDD4LQ96PU5 975 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 PRSS27Q9BQR3 290 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 IFT27Q9BW83 186 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 HDHD5Q9BXW7 423 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 GSDMCQ9BYG8 508 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 NDEL1Q9GZM8 345 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 RERGLQ9H628 205 aa13.01□□□□□ -0.33
NEDD4L-223ENST00000588516 PRMT8Q9NR22 394 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms