RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 MATN1P21941 496 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 LTBQ06643 244 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 QPRTQ15274 297 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 GPR68Q15743 365 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 CHI3L2Q15782 390 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 KRT71Q3SY84 523 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 TMEM176BQ3YBM2 270 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-205ENST00000587774 TMEM201Q5SNT2 666 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 TFAP2EQ6VUC0 442 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 ZNF704Q6ZNC4 412 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-205ENST00000587774 FCRLAQ7L513 359 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 OLIG3Q7RTU3 272 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 NUFIP2Q7Z417 695 aaKnown RBP16.72■□□□□ 0.27
TRIM47-205ENST00000587774 TUSC5Q8IXB3 177 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 GABRG1Q8N1C3 465 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 CIARTQ8N365 385 aaPredicted RBP16.72■□□□□ 0.27
TRIM47-205ENST00000587774 TOR1AIP2Q8NFQ8 470 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 OR5W2Q8NH69 310 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 IGFBPL1Q8WX77 278 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 PLPPR2Q96GM1 343 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 ZIM3Q96PE6 472 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 NMUR2Q9GZQ4 415 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 OR10A4Q9H209 315 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 AKTIPQ9H8T0 292 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 KCNE5Q9UJ90 142 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 GPR52Q9Y2T5 361 aa16.72■□□□□ 0.27
TRIM47-205ENST00000587774 CSPG4Q6UVK1 2322 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 CHD3Q12873 2000 aaKnown RBP16.71■□□□□ 0.27
TRIM47-205ENST00000587774 IGHV3-15A0A0B4J1V0 119 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 ESPNB1AK53 854 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 GCM2O75603 506 aaPredicted RBP16.71■□□□□ 0.27
TRIM47-205ENST00000587774 SERPINE1P05121 402 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 NR1H2P55055 460 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 ABCE1P61221 599 aaKnown RBP16.71■□□□□ 0.27
TRIM47-205ENST00000587774 SKP2Q13309 424 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 CBFBQ13951 182 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 SMU1Q2TAY7 513 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 SLC25A53Q5H9E4 307 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 CLEC9AQ6UXN8 241 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 C6orf120Q7Z4R8 191 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 YTHDF3Q7Z739 585 aaKnown RBP16.71■□□□□ 0.27
TRIM47-205ENST00000587774 MREGQ8N565 214 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 OR4A15Q8NGL6 344 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 S100PBPQ96BU1 408 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 C20orf27Q9GZN8 174 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 ABCA2Q9BZC7 2435 aa16.71■□□□□ 0.27
TRIM47-205ENST00000587774 A0A1W2PNR3 127 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 SERINC4A6NH21 518 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 DUXAA6NLW8 204 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 H7C1Q1 480 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 ETV2O00321 342 aaPredicted RBP16.7■□□□□ 0.26
TRIM47-205ENST00000587774 RNASET2O00584 256 aaKnown RBP16.7■□□□□ 0.26
TRIM47-205ENST00000587774 EIF4E2O60573 245 aaKnown RBP16.7■□□□□ 0.26
TRIM47-205ENST00000587774 FCMRO60667 390 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 STX11O75558 287 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 AK1P00568 194 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 ENPP1P22413 925 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 SLC7A1P30825 629 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 CASP9P55211 416 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 TSC22D1Q15714 1073 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 ARHGAP11BQ3KRB8 267 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 C3orf33Q6P1S2 294 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 PRSS57Q6UWY2 283 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 PLEKHM3Q6ZWE6 761 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 ANKRD46Q86W74 232 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 OR8J2Q8NGG1 315 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 SORT1Q99523 831 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 TMEM204Q9BSN7 226 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 GSX2Q9BZM3 304 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 ZNF350Q9GZX5 532 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 OR51I1Q9H343 314 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 GP6Q9HCN6 339 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 MKLN1Q9UL63 735 aa16.7■□□□□ 0.26
TRIM47-205ENST00000587774 YLPM1P49750 1951 aaKnown RBP16.69■□□□□ 0.26
TRIM47-205ENST00000587774 RGS16O15492 202 aaPredicted RBP16.69■□□□□ 0.26
TRIM47-205ENST00000587774 UGT2B17O75795 530 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 CYP7B1O75881 506 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 PRKD3O94806 890 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 H6PDO95479 791 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 HEXAP06865 529 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 PTH2RP49190 550 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 ZNF141Q15928 474 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 TIGD2Q4W5G0 525 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 ALKBH2Q6NS38 261 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 C16orf62Q7Z3J2 963 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 STEAP2Q8NFT2 490 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 PSD2Q9BQI7 771 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 THUMPD3Q9BV44 507 aaKnown RBP16.69■□□□□ 0.26
TRIM47-205ENST00000587774 DPY30Q9C005 99 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 QRSL1Q9H0R6 528 aaKnown RBP16.69■□□□□ 0.26
TRIM47-205ENST00000587774 ING1Q9UK53 422 aaPredicted RBP16.69■□□□□ 0.26
TRIM47-205ENST00000587774 RAP2CQ9Y3L5 183 aa16.69■□□□□ 0.26
TRIM47-205ENST00000587774 JMJD1CQ15652 2540 aa16.68■□□□□ 0.26
TRIM47-205ENST00000587774 TRIM64A6NGJ6 449 aa16.68■□□□□ 0.26
TRIM47-205ENST00000587774 TRIM64BA6NI03 449 aa16.68■□□□□ 0.26
TRIM47-205ENST00000587774 HS3ST1O14792 307 aa16.68■□□□□ 0.26
TRIM47-205ENST00000587774 SMAD9O15198 467 aaKnown RBP16.68■□□□□ 0.26
TRIM47-205ENST00000587774 TM9SF1O15321 606 aa16.68■□□□□ 0.26
TRIM47-205ENST00000587774 BIRC5O15392 142 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms