RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 ING2Q9H160 280 aa9.34□□□□□ -0.91
APOC1-201ENST00000586638 ARMC7Q9H6L4 198 aa9.34□□□□□ -0.91
APOC1-201ENST00000586638 NDRG4Q9ULP0 352 aaKnown RBP9.34□□□□□ -0.91
APOC1-201ENST00000586638 MYRFQ9Y2G1 1151 aa9.34□□□□□ -0.91
APOC1-201ENST00000586638 ATMQ13315 3056 aa9.34□□□□□ -0.91
APOC1-201ENST00000586638 LOC102723996A0A087X1L8 192 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 C17orf51A8MQB3 221 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 SCO2O43819 266 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ZNF354AO60765 605 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 FMO6PO60774 539 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 NADKO95544 446 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 UBL4AP11441 157 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ATP6V1B1P15313 513 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ABCD3P28288 659 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 FMO3P31513 532 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 IFNA8P32881 189 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 GGT2P36268 569 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ACAA2P42765 397 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 GPR4P46093 362 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 CCR4P51679 360 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 NUP107P57740 925 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ALDH6A1Q02252 535 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 IL18R1Q13478 541 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 APOFQ13790 326 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 LINC00303Q3SY05 128 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 KCTD21Q4G0X4 260 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 KLHL26Q53HC5 615 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 KIRREL2Q6UWL6 708 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 C6orf15Q6UXA7 325 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 APOOLQ6UXV4 268 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ZNF517Q6ZMY9 492 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 GRAMD2AQ8IUY3 354 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 APLFQ8IW19 511 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 CMIPQ8IY22 773 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 PARP8Q8N3A8 854 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 CADM2Q8N3J6 435 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 SETD9Q8NE22 299 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 FAM71CQ8NEG0 241 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 PIGXQ8TBF5 258 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 FAM81AQ8TBF8 368 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 PHOSPHO1Q8TCT1 267 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ACOT11Q8WXI4 607 aaPredicted RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 HSPBAP1Q96EW2 488 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 FAM46AQ96IP4 442 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 GPA33Q99795 319 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 PRSS27Q9BQR3 290 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 MRPS26Q9BYN8 205 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 POLR2J2Q9GZM3 115 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 POLR2J3Q9H1A7 115 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 DSN1Q9H410 356 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 ANKRD19PQ9H560 264 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 EVA1AQ9H8M9 152 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 CNIH4Q9P003 139 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 REV1Q9UBZ9 1251 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 MRTO4Q9UKD2 239 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 PPIEQ9UNP9 301 aaKnown RBP9.33□□□□□ -0.92
APOC1-201ENST00000586638 SLC35A3Q9Y2D2 325 aa9.33□□□□□ -0.92
APOC1-201ENST00000586638 MPDZO75970 2070 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 IGHV1-45A0A0A0MS14 117 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 A0A0B4J2E0 115 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 A0A1B0GWA3 101 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 A0A1B0GX12 115 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 WWP2O00308 870 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 KPNA4O00629 521 aaPredicted RBP9.32□□□□□ -0.92
APOC1-201ENST00000586638 SCDO00767 359 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 GNB5O14775 395 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 KLF7O75840 302 aaPredicted RBP9.32□□□□□ -0.92
APOC1-201ENST00000586638 TP53P04637 393 aaPredicted RBP9.32□□□□□ -0.92
APOC1-201ENST00000586638 COX6A1P12074 109 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 OSMP13725 252 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 TBXA2RP21731 343 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 CHMP24386 653 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 POU1F1P28069 291 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 RYKP34925 604 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 OMPP47874 163 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 CRISP1P54107 249 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 SKP2Q13309 424 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 MAD2L1BPQ15013 274 aaPredicted RBP9.32□□□□□ -0.92
APOC1-201ENST00000586638 BTBD16Q32M84 506 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 TMEM236Q5W0B7 351 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 LAIR2Q6ISS4 152 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 ZNF550Q7Z398 422 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 ZER1Q7Z7L7 766 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 KIF18BQ86Y91 864 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 NRMQ8IXM6 262 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 LINC00471Q8N535 108 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 IQCF1Q8N6M8 205 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 ZNF527Q8NB42 609 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 C17orf47Q8NEP4 570 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 TSPAN14Q8NG11 270 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 OR2Y1Q8NGV0 311 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 PFN4Q8NHR9 129 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 NUBPLQ8TB37 319 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 GNPDA2Q8TDQ7 276 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 SH3YL1Q96HL8 342 aaPredicted RBP9.32□□□□□ -0.92
APOC1-201ENST00000586638 APOL4Q9BPW4 351 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 KLHDC3Q9BQ90 382 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 ZPBPQ9BS86 351 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 RTN4RQ9BZR6 473 aa9.32□□□□□ -0.92
APOC1-201ENST00000586638 HOXD1Q9GZZ0 328 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms