RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 RPS7P62081 194 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SNRPD2P62316 118 aaKnown RBP13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC3A1Q07837 685 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZNF767PQ75MW2 155 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 GPR135Q8IZ08 494 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CDK20Q8IZL9 346 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 DTX3Q8N9I9 347 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C17orf47Q8NEP4 570 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR13C2Q8NGS9 318 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ZCCHC10Q8TBK6 192 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 C4orf36Q96KX1 117 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PGLYRP3Q96LB9 341 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR2A5Q96R48 311 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 OR51V1Q9H2C8 321 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TRPV4Q9HBA0 871 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 ADGRL4Q9HBW9 690 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 PRDM9Q9NQV7 894 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 FBXO34Q9NWN3 711 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TMEM5Q9Y2B1 443 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 HSPB11Q9Y547 144 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 SLC22A7Q9Y694 548 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 CACNG2Q9Y698 323 aa13.15□□□□□ -0.3
CDK5RAP3-237ENST00000585163 TBC1D3EA0A087X179 549 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A1B0GVC2 190 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A6NIN4 97 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MRPL3P09001 348 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC2A5P22732 501 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NOS3P29474 1203 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BMP8BP34820 402 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF85Q03923 595 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 C19orf57Q0VDD7 668 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 HACD4Q5VWC8 232 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PYHIN1Q6K0P9 492 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 LYPD8Q6UX82 237 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BMP8AQ7Z5Y6 402 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR14C36Q8NHC7 312 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ERVMER34-1Q9H9K5 563 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ADAP2Q9NPF8 381 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DUSP22Q9NRW4 184 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TMEM74BQ9NUR3 256 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NCKAP1Q9Y2A7 1128 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC9B1P1A6NJY1 282 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 P2RX6O15547 441 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 EEF1E1O43324 174 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CHP2O43745 196 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 B3GALT2O43825 422 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SAGP10523 405 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GHDCQ8N2G8 530 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ESX1Q8N693 406 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FLVCR1-AS1Q8TAF5 88 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TRMT10AQ8TBZ6 339 aaKnown RBP13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MEPEQ9NQ76 525 aaPredicted RBP13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 HAO2Q9NYQ3 351 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MED31Q9Y3C7 131 aa13.14□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NPIPA5A0A0B4J1W7 369 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PRSS38A1L453 326 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 C7orf66A4D0T2 115 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RIIAD1A6NNX1 92 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NPIPA7E9PJI5 369 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 J3QLW9 94 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PLRG1O43660 514 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FZD7O75084 574 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 PTP4A3O75365 173 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SOX30O94993 753 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NPIPA8P0DM63 369 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CLUP10909 449 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF19P17023 458 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 MAT2AP31153 395 aaKnown RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CAPZA2P47755 286 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR12D2P58182 307 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NTRK2Q16620 822 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC25A35Q3KQZ1 300 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 AMZ1Q400G9 498 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC36A2Q495M3 483 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 BCL2L15Q5TBC7 163 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ZNF776Q68DI1 518 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DMKNQ6E0U4 476 aaPredicted RBP13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 RPTNQ6XPR3 784 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CDRT4Q8N9R6 151 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SLC22A18Q96BI1 424 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SCMH1Q96GD3 660 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 OR2M4Q96R27 311 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 STACQ99469 402 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 C1QTNF7Q9BXJ2 289 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 SRMSQ9H3Y6 488 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 GDE1Q9NZC3 331 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 NPFFR2Q9Y5X5 522 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TRAV27A0A087WT01 109 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 A0A087WV62 115 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 CTSVO60911 334 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 DHFRP00374 187 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ATP1B1P05026 303 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 APODP05090 189 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ACVR1BP36896 505 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ID2Q02363 134 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 ACSM3Q53FZ2 586 aa13.13□□□□□ -0.31
CDK5RAP3-237ENST00000585163 TMEM240Q5SV17 173 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms