RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 APOOLQ6UXV4 268 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CD180Q99467 661 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 ORAI3Q9BRQ5 295 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 EMC6Q9BV81 110 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 PRODH2Q9UF12 536 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 MAPRE3Q9UPY8 281 aa9.49□□□□□ -0.89
RFFL-212ENST00000584655 CLCA1A8K7I4 914 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 SCDO00767 359 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 POLR1CO15160 346 aaPredicted RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 ICOSLGO75144 302 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MAGEA2P43356 314 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 GLYR1Q49A26 553 aaPredicted RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 NPSR1Q6W5P4 371 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 SLC35D2Q76EJ3 337 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 CENPSQ8N2Z9 138 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 DNAJC22Q8N4W6 341 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ADAMTS18Q8TE60 1221 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ASB12Q8WXK4 309 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MYDGFQ969H8 173 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 FCRL1Q96LA6 429 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 SLC38A2Q96QD8 506 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 NUDT9Q9BW91 350 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 TRIM2Q9C040 744 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 GPC6Q9Y625 555 aaPredicted RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 PIEZO1Q92508 2521 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 RELNP78509 3460 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 KIAA0513O60268 411 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ETV5P41161 510 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ETV1P50549 477 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 SLC35A2P78381 396 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MELKQ14680 651 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 PRICKLE4Q2TBC4 344 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 DEPDC4Q8N2C3 294 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 CDRT4Q8N9R6 151 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ANKK1Q8NFD2 765 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 FNDC8Q8TC99 324 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 CAPSLQ8WWF8 208 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 DUS3LQ96G46 650 aaKnown RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 EPYCQ99645 322 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MAN2C1Q9NTJ4 1040 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 CBLCQ9ULV8 474 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 PCNX3Q9H6A9 2034 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MED13Q9UHV7 2174 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 A0A087WV48 116 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 A0A0G2JPF8 293 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 A0A1W2PQM1 296 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 HNRNPCL2B2RXH8 293 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 HNRNPCL3B7ZW38 293 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 DLL1O00548 723 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ARHGEF9O43307 516 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 HNRNPCL4P0DMR1 293 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 DUSP8Q13202 625 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 OR4Q3Q8NH05 313 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 OR4C6Q8NH72 309 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 ULBP3Q9BZM4 244 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 ISG20L2Q9H9L3 353 aaKnown RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 FBRSQ9HAH7 460 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 HHATLQ9HCP6 504 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 A4GALTQ9NPC4 353 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 RPRD1BQ9NQG5 326 aaKnown RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 COPS7AQ9UBW8 275 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 MED31Q9Y3C7 131 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 PTRH2Q9Y3E5 179 aaKnown RBP9.48□□□□□ -0.89
RFFL-212ENST00000584655 ENTPD2Q9Y5L3 495 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 FREM3P0C091 2139 aa9.48□□□□□ -0.89
RFFL-212ENST00000584655 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 A0A0B4J203 849 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 A0A1W2PR77 199 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 TLCD2A6NGC4 264 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 C12orf71A8MTZ7 269 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 ZNF28P17035 718 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 MSANTD1Q6ZTZ1 278 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 USP51Q70EK9 711 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 BMP8AQ7Z5Y6 402 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 RFLNBQ8N5W9 214 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 RHOXF1Q8NHV9 184 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 GIMAP5Q96F15 307 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 TCTN2Q96GX1 697 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 HRASLS5Q96KN8 279 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 C5orf34Q96MH7 638 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 HINT3Q9NQE9 182 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 CASKO14936 926 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 POU2F2P09086 479 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 DECR1Q16698 335 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 RBM48Q5RL73 367 aaKnown RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 RDH10Q8IZV5 341 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 ZNF619Q8N2I2 560 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 COX4I2Q96KJ9 171 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 Q96M85 177 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 VN1R1Q9GZP7 353 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 TSPAN10Q9H1Z9 355 aaPredicted RBP9.47□□□□□ -0.89
RFFL-212ENST00000584655 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 SLC25A12O75746 678 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 DNAJB5O75953 348 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 CCR5P51681 352 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 RAB38P57729 211 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 PROX2Q3B8N5 592 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 DHRS13Q6UX07 377 aa9.47□□□□□ -0.89
RFFL-212ENST00000584655 CAMKMTQ7Z624 323 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms