RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 GP1BBP13224 206 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 PRG2P13727 222 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 DPP4P27487 766 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 SRD5A2P31213 254 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 RFC3P40938 356 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 ACAA2P42765 397 aaKnown RBP16.65■□□□□ 0.26
RFFL-211ENST00000584541 IDH2P48735 452 aaKnown RBP16.65■□□□□ 0.26
RFFL-211ENST00000584541 ZNF136P52737 540 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 PPIAP62937 165 aaKnown RBP16.65■□□□□ 0.26
RFFL-211ENST00000584541 HOXC5Q00444 222 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 QPRTQ15274 297 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 HYAL4Q2M3T9 481 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 PLEKHM3Q6ZWE6 761 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 ZDHHC21Q8IVQ6 265 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 CADM2Q8N3J6 435 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 OR4D11Q8NGI4 311 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 NR4A3Q92570 626 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 STMN2Q93045 179 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 C1GALT1C1Q96EU7 318 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 AMBRA1Q9C0C7 1298 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 POLR2J2Q9GZM3 115 aaKnown RBP16.65■□□□□ 0.26
RFFL-211ENST00000584541 POLR2J3Q9H1A7 115 aaKnown RBP16.65■□□□□ 0.26
RFFL-211ENST00000584541 IL1RAPQ9NPH3 570 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 QPCTLQ9NXS2 382 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 TAS2R10Q9NYW0 307 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 SELENONQ9NZV5 590 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 LHX6Q9UPM6 363 aa16.65■□□□□ 0.26
RFFL-211ENST00000584541 FAM166BA8MTA8 275 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 hCG_2039718K7EN88 272 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 TRAPPC6AO75865 159 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 GLSO94925 669 aaPredicted RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 CRYABP02511 175 aaKnown RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 ZNF24P17028 368 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 HK1P19367 917 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 SLC7A1P30825 629 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 TAS2R41P59536 307 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 KLRB1Q12918 225 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 NPTX1Q15818 432 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ENTPD8Q5MY95 495 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 WBP2NLQ6ICG8 309 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ZFP1Q6P2D0 407 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 RBM45Q8IUH3 476 aaKnown RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 FAM109AQ8N4B1 249 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ST8SIA1Q92185 356 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ZBTB8AQ96BR9 441 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 WFDC6Q9BQY6 131 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ZNF703Q9H7S9 590 aaPredicted RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 CCM2LQ9NUG4 571 aaPredicted RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 MED17Q9NVC6 651 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 VDAC3Q9Y277 283 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 MRPS18CQ9Y3D5 142 aaKnown RBP16.64■□□□□ 0.25
RFFL-211ENST00000584541 HRH3Q9Y5N1 445 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 ENPP4Q9Y6X5 453 aa16.64■□□□□ 0.25
RFFL-211ENST00000584541 CPSF4LA6NMK7 179 aaKnown RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 H0YHG0 523 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 TFECO14948 347 aaPredicted RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 ADAM11O75078 769 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 RFPL3SP0C7P2 107 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 EIF1P41567 113 aaKnown RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 HTR3AP46098 478 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 VLDLRP98155 873 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 PMP22Q01453 160 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 LY6DQ14210 128 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 OR1Q1Q15612 314 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 PLPPR5Q32ZL2 321 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 ARSKQ6UWY0 536 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 PIWIL3Q7Z3Z3 882 aaKnown RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 TMEM251Q8N6I4 163 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 LSMEM1Q8N8F7 131 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 OR14L1PQ8NHC6 308 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 DUS3LQ96G46 650 aaKnown RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 C7orf34Q96L11 122 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 PRRC1Q96M27 445 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 ZNF300Q96RE9 604 aaPredicted RBP16.63■□□□□ 0.25
RFFL-211ENST00000584541 ZNF347Q96SE7 839 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 CHID1Q9BWS9 393 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 UBQLN3Q9H347 655 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 LUZP4Q9P127 313 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 MGAQ8IWI9 3026 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 FREM3P0C091 2139 aa16.63■□□□□ 0.25
RFFL-211ENST00000584541 LAMA5O15230 3695 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 B4DXG7 233 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 ENTPD5O75356 428 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 RHCEP18577 417 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 HTR2AP28223 471 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 GCKP35557 465 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 SLC1A3P43003 542 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 MAGEA2P43356 314 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 MAGEA5P43359 124 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 YAP1P46937 504 aaKnown RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 ALDH6A1Q02252 535 aaKnown RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 SLC10A1Q14973 349 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 TOMM34Q15785 309 aaPredicted RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 GLYR1Q49A26 553 aaPredicted RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 ZNF613Q6PF04 617 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 FAM180AQ6UWF9 173 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 GRINAQ7Z429 371 aa16.62■□□□□ 0.25
RFFL-211ENST00000584541 PAPD5Q8NDF8 572 aaKnown RBP16.62■□□□□ 0.25
RFFL-211ENST00000584541 RNF217Q8TC41 542 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms