RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 SLC38A5Q8WUX1 472 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.41□□□□□ -0.9
SS18-221ENST00000582448 ITLN2Q8WWU7 325 aaPredicted RBP9.41□□□□□ -0.9
SS18-221ENST00000582448 KAT2AQ92830 837 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 ZNF597Q96LX8 424 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 ZNF570Q96NI8 536 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 DGAT2Q96PD7 388 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 SYT3Q9BQG1 590 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 BTBD2Q9BX70 525 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 PRTFDC1Q9NRG1 225 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 SLC22A11Q9NSA0 550 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
SS18-221ENST00000582448 PLA2G3Q9NZ20 509 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 SEC14L3Q9UDX4 400 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 AP4B1Q9Y6B7 739 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 X6R8D5 127 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 ABCA12Q86UK0 2595 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 LRBAP50851 2863 aa9.41□□□□□ -0.9
SS18-221ENST00000582448 ZGRF1Q86YA3 2104 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 H3BMH7 237 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 hCG_2039718K7EN88 272 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 SOCS6O14544 535 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 ADAMDEC1O15204 470 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 DENRO43583 198 aaKnown RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 FGF17O60258 216 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 B4GALT2O60909 372 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 LDB3O75112 727 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 PRSS23O95084 383 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 F10P00742 488 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 C1QCP02747 245 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OPN1SWP03999 348 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 ALOX5P09917 674 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 CDH2P19022 906 aaPredicted RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 TNNI3P19429 210 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 IFNA8P32881 189 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 RAD23AP54725 363 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 ID2Q02363 134 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 EEF1A2Q05639 463 aaKnown RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 GK3PQ14409 553 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 LTB4RQ15722 352 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OTUD3Q5T2D3 398 aaPredicted RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 B3GNTL1Q67FW5 361 aaPredicted RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 ZCCHC12Q6PEW1 402 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 KIRREL2Q6UWL6 708 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 ISLR2Q6UXK2 745 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OVCH1Q7RTY7 1134 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 GALNT10Q86SR1 603 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 PRSS58Q8IYP2 241 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OR2L13Q8N349 312 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OR10Q1Q8NGQ4 319 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 OR51Q1Q8NH59 317 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 ZNF675Q8TD23 568 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 SLC9A6Q92581 669 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 RELTQ969Z4 430 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 RDH12Q96NR8 316 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 RBM4BQ9BQ04 359 aaKnown RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 YIPF4Q9BSR8 244 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 RBM4Q9BWF3 364 aaKnown RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 CHST11Q9NPF2 352 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 NTMQ9P121 344 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 KIF17Q9P2E2 1029 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 C19orf53Q9UNZ5 99 aaPredicted RBP9.4□□□□□ -0.9
SS18-221ENST00000582448 HS3ST3B1Q9Y662 390 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 MAU2Q9Y6X3 613 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 POLEQ07864 2286 aa9.4□□□□□ -0.9
SS18-221ENST00000582448 SVILO95425 2214 aa9.4□□□□□ -0.91
SS18-221ENST00000582448 MYO7BQ6PIF6 2116 aa9.4□□□□□ -0.91
SS18-221ENST00000582448 A0A1B0GX78 115 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 MAGEA13PA6NCF6 341 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 FAM227AF5H4B4 570 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 PDLIM1O00151 329 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 UPK1AO00322 258 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SOCS2O14508 198 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 EI24O14681 340 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 DSCR3O14972 297 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 FOXS1O43638 330 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 PLOD3O60568 738 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 AK1P00568 194 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 IFNA16P05015 189 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ETS2P15036 469 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 FBLP22087 321 aaKnown RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 PTGER4P35408 488 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 XCR1P46094 333 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 OR1D4P47884 311 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ALDH3A2P51648 485 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 SMIM11AP58511 58 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 MRPS35P82673 323 aaKnown RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 Q0VFX4 171 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 DAG1Q14118 895 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 PDK3Q15120 406 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 RFX4Q33E94 735 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ZNF628Q5EBL2 1059 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 MFSD4BQ5TF39 518 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 KRT80Q6KB66 452 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 MFSD12Q6NUT3 480 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 CDC73Q6P1J9 531 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 VTCN1Q7Z7D3 282 aa9.39□□□□□ -0.91
SS18-221ENST00000582448 ST13P4Q8IZP2 240 aaPredicted RBP9.39□□□□□ -0.91
SS18-221ENST00000582448 DHRSXQ8N5I4 330 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms