RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 RAB39AQ14964 217 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 TMEM44Q2T9K0 475 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 ALG10BQ5I7T1 473 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 GPR107Q5VW38 600 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 SLX4IPQ5VYV7 408 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 ULK3Q6PHR2 472 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 HSDL2Q6YN16 418 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 PRSS48Q7RTY5 328 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 LAPTM4BQ86VI4 370 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 NKAIN4Q8IVV8 208 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 SPACA3Q8IXA5 215 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 NRMQ8IXM6 262 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 SLC34A3Q8N130 599 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 ZNF563Q8TA94 476 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 ZNF721Q8TF20 911 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 TMEM255BQ8WV15 326 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 FCGR1BQ92637 280 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 UBE2FQ969M7 185 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 RNF31Q96EP0 1072 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 CRELD1Q96HD1 420 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 TAAR9Q96RI9 348 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 ADOQ96SZ5 270 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 CRB3Q9BUF7 120 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 NUDT9Q9BW91 350 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 TSSK6Q9BXA6 273 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 MAN2C1Q9NTJ4 1040 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 OCIAD1Q9NX40 245 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 CNIH4Q9P003 139 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 REV1Q9UBZ9 1251 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 AASSQ9UDR5 926 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 DTX4Q9Y2E6 619 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 NTNG1Q9Y2I2 539 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 AHCTF1Q8WYP5 2266 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 PKD1L2Q7Z442 2459 aa8.55□□□□□ -1.04
SS18-220ENST00000582092 PTPRQQ9UMZ3 2332 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TEX51A0A1B0GUA7 166 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ELOA3DA6NLF2 546 aaPredicted RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 ZNF701M0R085 212 aaPredicted RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 MEN1O00255 615 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ZNF264O43296 627 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 NDUFB5O43674 189 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CHP2O43745 196 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TLX2O43763 284 aaPredicted RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 HCN1O60741 890 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 SEMA7AO75326 666 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PPM1BO75688 479 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 OR6B1O95007 311 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 FADS2O95864 444 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 DDAH2O95865 285 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 IGKV1D-16P01601 117 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CYC1P08574 325 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 LIPCP11150 499 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PRG2P13727 222 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TBXA2RP21731 343 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 FPR3P25089 353 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ITPKBP27987 946 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PSMB9P28065 219 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 RBM34P42696 430 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 GPR4P46093 362 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 SLC6A8P48029 635 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PCYT1AP49585 367 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ZNF136P52737 540 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 MC2RQ01718 297 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PRKCDQ05655 676 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 PIGFQ07326 219 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 EFR3AQ14156 821 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ELOA3BQ3SY89 546 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 KLHL22Q53GT1 634 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 DCAF12Q5T6F0 453 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 AP1ARQ63HQ0 302 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 WBP2NLQ6ICG8 309 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CPEB2Q7Z5Q1 589 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 ANKRD37Q7Z713 158 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ZAR1Q86SH2 424 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 C10orf53Q8N6V4 93 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TCEANCQ8N8B7 351 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ZSCAN1Q8NBB4 408 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 B3GNT7Q8NFL0 401 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ELOA3Q8NG57 546 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 C9orf43Q8TAL5 461 aaPredicted RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 ZNF420Q8TAQ5 688 aaPredicted RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 RFKQ969G6 155 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TP53INP1Q96A56 240 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 TMIGD2Q96BF3 282 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 OTULINQ96BN8 352 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 VMP1Q96GC9 406 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ZPBPQ9BS86 351 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 FUZQ9BT04 418 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 ULBP3Q9BZM4 244 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 WWTR1Q9GZV5 400 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 NXF5Q9H1B4 397 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 DUSP21Q9H596 190 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 FBXO8Q9NRD0 319 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 DNAJB12Q9NXW2 375 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 ZNF226Q9NYT6 803 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CNOT2Q9NZN8 540 aaKnown RBP8.54□□□□□ -1.04
SS18-220ENST00000582092 PSORS1C1Q9UIG5 152 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 KCNE5Q9UJ90 142 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CLDN16Q9Y5I7 305 aa8.54□□□□□ -1.04
SS18-220ENST00000582092 CEPT1Q9Y6K0 416 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms