RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 PAX1P15863 534 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 CCKARP32238 428 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 TMED10P49755 219 aaKnown RBP17.43■□□□□ 0.38
LIMD2-209ENST00000580222 NUDT2P50583 147 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 PSPHP78330 225 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIMD2-209ENST00000580222 MIPOL1Q8TD10 442 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 PIK3R3Q92569 461 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 HOXB13Q92826 284 aaPredicted RBP17.43■□□□□ 0.38
LIMD2-209ENST00000580222 CDS1Q92903 461 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 OMA1Q96E52 524 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 STACQ99469 402 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 EFCAB1Q9HAE3 211 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 DUSP22Q9NRW4 184 aa17.43■□□□□ 0.38
LIMD2-209ENST00000580222 GXYLT2A0PJZ3 443 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 DUXAA6NLW8 204 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 EVPLLA8MZ36 301 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 WIPF1O43516 503 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 IFNA2P01563 188 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 OR12D1P0DN82 309 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 CYP4B1P13584 511 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 ABCD3P28288 659 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 IL12BP29460 328 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 MAP3K8P41279 467 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 CRATP43155 626 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 RFX3P48380 749 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 POU6F2P78424 691 aaPredicted RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 TXNL4AP83876 142 aaKnown RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 SRYQ05066 204 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 KRT72Q14CN4 511 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 TOMM20Q15388 145 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 DECR1Q16698 335 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 RUNDC3AQ59EK9 446 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 EXOSC6Q5RKV6 272 aaKnown RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 ZNF550Q7Z398 422 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 MEIOBQ8N635 442 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 FAM83FQ8NEG4 500 aaPredicted RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 OR4N2Q8NGD1 307 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 TMBIM1Q969X1 311 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 ROPN1LQ96C74 230 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 LRRC58Q96CX6 371 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 SECISBP2Q96T21 854 aaKnown RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 CPPED1Q9BRF8 314 aaPredicted RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 ANGPTL4Q9BY76 406 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 RYDENQ9NUL5 291 aaKnown RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 GIN1Q9NXP7 522 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 MRTO4Q9UKD2 239 aaKnown RBP17.42■□□□□ 0.38
LIMD2-209ENST00000580222 CORO2BQ9UQ03 480 aa17.42■□□□□ 0.38
LIMD2-209ENST00000580222 GNB5O14775 395 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 REM1O75628 298 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 AGR2O95994 175 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 NPPAP01160 153 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 CPN1P15169 458 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 MTPNP58546 118 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 MRPS22P82650 360 aaKnown RBP17.41■□□□□ 0.38
LIMD2-209ENST00000580222 KRTAP24-1Q3LI83 254 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 CYP27C1Q4G0S4 372 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 COX20Q5RI15 118 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 ATAD3BQ5T9A4 648 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 ZNF474Q6S9Z5 364 aaPredicted RBP17.41■□□□□ 0.38
LIMD2-209ENST00000580222 PLEKHM3Q6ZWE6 761 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 SPPL2AQ8TCT8 520 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 RAB8BQ92930 207 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 SLC35A4Q96G79 324 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 ANKRD27Q96NW4 1050 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 SLC39A3Q9BRY0 314 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 PIGMQ9H3S5 423 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 EXD2Q9NVH0 621 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 CLCF1Q9UBD9 225 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 PACSIN3Q9UKS6 424 aa17.41■□□□□ 0.38
LIMD2-209ENST00000580222 A0A1W2PNV4 684 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 FXYD1O00168 92 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 PPM1BO75688 479 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 TGM6O95932 706 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 ETFAP13804 333 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 CASP3P42574 277 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 MAGEA8P43361 318 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 MVDP53602 400 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 PSMD4P55036 377 aaKnown RBP17.4■□□□□ 0.38
LIMD2-209ENST00000580222 DSTNP60981 165 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 MXRA7P84157 204 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 FADDQ13158 208 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 RGNQ15493 299 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 DCST2Q5T1A1 773 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 DESI1Q6ICB0 168 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 FIGNL1Q6PIW4 674 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 C16orf62Q7Z3J2 963 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 DND1Q8IYX4 353 aaKnown RBP17.4■□□□□ 0.38
LIMD2-209ENST00000580222 XAGE5Q8WWM1 108 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 WNT2BQ93097 391 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 EFHD2Q96C19 240 aaPredicted RBP17.4■□□□□ 0.38
LIMD2-209ENST00000580222 STARD4Q96DR4 205 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 ZC3HAV1LQ96H79 300 aaKnown RBP17.4■□□□□ 0.38
LIMD2-209ENST00000580222 UCN2Q96RP3 112 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 TM9SF2Q99805 663 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 MED18Q9BUE0 208 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 THUMPD3Q9BV44 507 aaKnown RBP17.4■□□□□ 0.38
LIMD2-209ENST00000580222 BTBD2Q9BX70 525 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 YAE1D1Q9NRH1 226 aa17.4■□□□□ 0.38
LIMD2-209ENST00000580222 KCNE3Q9Y6H6 103 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms